Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RPAP1Q9BWH6 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC18.51■□□□□ 0.55
RPAP1Q9BWH6 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RPAP1Q9BWH6 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC18.51■□□□□ 0.55
RPAP1Q9BWH6 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RPAP1Q9BWH6 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPAP1Q9BWH6 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPAP1Q9BWH6 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RPAP1Q9BWH6 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RPAP1Q9BWH6 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPAP1Q9BWH6 CICP23-201ENST00000605013 2741 ntBASIC18.51■□□□□ 0.55
RPAP1Q9BWH6 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPAP1Q9BWH6 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPAP1Q9BWH6 AC104457.1-201ENST00000401024 814 ntBASIC18.51■□□□□ 0.55
RPAP1Q9BWH6 GHSR-202ENST00000427970 912 ntBASIC18.51■□□□□ 0.55
RPAP1Q9BWH6 RPL13AP20-201ENST00000459725 609 ntBASIC18.51■□□□□ 0.55
RPAP1Q9BWH6 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC18.51■□□□□ 0.55
RPAP1Q9BWH6 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPAP1Q9BWH6 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC18.51■□□□□ 0.55
RPAP1Q9BWH6 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC18.51■□□□□ 0.55
RPAP1Q9BWH6 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC18.51■□□□□ 0.55
RPAP1Q9BWH6 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC18.51■□□□□ 0.55
RPAP1Q9BWH6 KSR1-207ENST00000578981 748 ntTSL 4 BASIC18.51■□□□□ 0.55
RPAP1Q9BWH6 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.51■□□□□ 0.55
RPAP1Q9BWH6 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RPAP1Q9BWH6 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPAP1Q9BWH6 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPAP1Q9BWH6 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RPAP1Q9BWH6 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPAP1Q9BWH6 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RPAP1Q9BWH6 CICP11-201ENST00000434745 2827 ntBASIC18.49■□□□□ 0.55
RPAP1Q9BWH6 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.49■□□□□ 0.55
RPAP1Q9BWH6 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPAP1Q9BWH6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPAP1Q9BWH6 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPAP1Q9BWH6 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPAP1Q9BWH6 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RPAP1Q9BWH6 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPAP1Q9BWH6 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC18.49■□□□□ 0.55
RPAP1Q9BWH6 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPAP1Q9BWH6 BCYRN1-201ENST00000418539 200 ntBASIC18.49■□□□□ 0.55
RPAP1Q9BWH6 PFN2-205ENST00000461868 613 ntTSL 2 BASIC18.49■□□□□ 0.55
RPAP1Q9BWH6 ZNF767P-206ENST00000513792 565 ntBASIC18.49■□□□□ 0.55
RPAP1Q9BWH6 AHRR-211ENST00000515206 462 ntTSL 5 BASIC18.49■□□□□ 0.55
RPAP1Q9BWH6 AP001582.1-201ENST00000525856 295 ntBASIC18.49■□□□□ 0.55
RPAP1Q9BWH6 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.49■□□□□ 0.55
RPAP1Q9BWH6 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC18.49■□□□□ 0.55
RPAP1Q9BWH6 AC103810.3-201ENST00000583567 96 ntBASIC18.49■□□□□ 0.55
RPAP1Q9BWH6 AC243960.2-201ENST00000600996 747 ntBASIC18.49■□□□□ 0.55
RPAP1Q9BWH6 AP005019.2-201ENST00000615104 511 ntBASIC18.49■□□□□ 0.55
RPAP1Q9BWH6 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPAP1Q9BWH6 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPAP1Q9BWH6 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.49■□□□□ 0.55
RPAP1Q9BWH6 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPAP1Q9BWH6 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.49■□□□□ 0.55
RPAP1Q9BWH6 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPAP1Q9BWH6 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPAP1Q9BWH6 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RPAP1Q9BWH6 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPAP1Q9BWH6 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.48■□□□□ 0.55
RPAP1Q9BWH6 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
RPAP1Q9BWH6 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms