Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 AC005912.2-201ENST00000619492 2400 ntBASIC12.3□□□□□ -0.44
RNF2Q99496 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF2Q99496 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.3□□□□□ -0.44
RNF2Q99496 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF2Q99496 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF2Q99496 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
RNF2Q99496 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF2Q99496 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF2Q99496 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RNF2Q99496 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF2Q99496 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.3□□□□□ -0.44
RNF2Q99496 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
RNF2Q99496 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF2Q99496 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF2Q99496 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.3□□□□□ -0.44
RNF2Q99496 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
RNF2Q99496 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF2Q99496 AL627223.1-201ENST00000416693 442 ntBASIC12.3□□□□□ -0.44
RNF2Q99496 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.3□□□□□ -0.44
RNF2Q99496 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.3□□□□□ -0.44
RNF2Q99496 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
RNF2Q99496 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.3□□□□□ -0.44
RNF2Q99496 AC023511.2-201ENST00000618803 211 ntBASIC12.3□□□□□ -0.44
RNF2Q99496 AC055717.3-201ENST00000622967 595 ntBASIC12.3□□□□□ -0.44
RNF2Q99496 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RNF2Q99496 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
RNF2Q99496 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RNF2Q99496 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RNF2Q99496 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF2Q99496 AL139385.1-201ENST00000611744 3272 ntBASIC12.3□□□□□ -0.44
RNF2Q99496 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.3□□□□□ -0.44
RNF2Q99496 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF2Q99496 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF2Q99496 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RNF2Q99496 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RNF2Q99496 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
RNF2Q99496 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
RNF2Q99496 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.3□□□□□ -0.44
RNF2Q99496 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
RNF2Q99496 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF2Q99496 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
RNF2Q99496 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.3□□□□□ -0.44
RNF2Q99496 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF2Q99496 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF2Q99496 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
RNF2Q99496 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF2Q99496 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RNF2Q99496 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF2Q99496 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.29□□□□□ -0.44
RNF2Q99496 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.29□□□□□ -0.44
RNF2Q99496 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
RNF2Q99496 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.29□□□□□ -0.44
RNF2Q99496 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF2Q99496 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RNF2Q99496 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
RNF2Q99496 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF2Q99496 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF2Q99496 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.29□□□□□ -0.44
RNF2Q99496 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.29□□□□□ -0.44
RNF2Q99496 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.29□□□□□ -0.44
RNF2Q99496 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RNF2Q99496 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
RNF2Q99496 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF2Q99496 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.29□□□□□ -0.44
RNF2Q99496 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.29□□□□□ -0.44
RNF2Q99496 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF2Q99496 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
RNF2Q99496 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF2Q99496 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF2Q99496 FAM220BP-201ENST00000377689 816 ntBASIC12.29□□□□□ -0.44
RNF2Q99496 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF2Q99496 HLA-H-201ENST00000383620 1096 ntBASIC12.29□□□□□ -0.44
RNF2Q99496 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RNF2Q99496 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RNF2Q99496 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF2Q99496 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.29□□□□□ -0.44
RNF2Q99496 AC004967.1-201ENST00000453589 447 ntBASIC12.29□□□□□ -0.44
RNF2Q99496 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RNF2Q99496 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.29□□□□□ -0.44
RNF2Q99496 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.29□□□□□ -0.44
RNF2Q99496 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC12.29□□□□□ -0.44
RNF2Q99496 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
RNF2Q99496 SNHG9-202ENST00000564014 471 ntBASIC12.29□□□□□ -0.44
RNF2Q99496 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF2Q99496 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.29□□□□□ -0.44
RNF2Q99496 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC12.29□□□□□ -0.44
RNF2Q99496 AL596442.2-201ENST00000610240 980 ntBASIC12.29□□□□□ -0.44
RNF2Q99496 AC084121.4-201ENST00000641598 221 ntBASIC12.29□□□□□ -0.44
RNF2Q99496 AF228730.8-201ENST00000642140 221 ntBASIC12.29□□□□□ -0.44
RNF2Q99496 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
RNF2Q99496 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF2Q99496 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF2Q99496 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF2Q99496 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.29□□□□□ -0.44
RNF2Q99496 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
RNF2Q99496 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RNF2Q99496 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
RNF2Q99496 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.29□□□□□ -0.44
RNF2Q99496 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.29□□□□□ -0.44
RNF2Q99496 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms