Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 AL031595.1-201ENST00000623969 4709 ntBASIC12.49□□□□□ -0.41
RAB40CQ96S21 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB40CQ96S21 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RAB40CQ96S21 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB40CQ96S21 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB40CQ96S21 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
RAB40CQ96S21 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB40CQ96S21 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB40CQ96S21 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
RAB40CQ96S21 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC12.48□□□□□ -0.41
RAB40CQ96S21 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RAB40CQ96S21 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
RAB40CQ96S21 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.48□□□□□ -0.41
RAB40CQ96S21 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
RAB40CQ96S21 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
RAB40CQ96S21 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RAB40CQ96S21 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB40CQ96S21 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB40CQ96S21 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
RAB40CQ96S21 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB40CQ96S21 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
RAB40CQ96S21 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB40CQ96S21 ZNF259P1-201ENST00000407656 1365 ntBASIC12.48□□□□□ -0.41
RAB40CQ96S21 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB40CQ96S21 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB40CQ96S21 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB40CQ96S21 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.48□□□□□ -0.41
RAB40CQ96S21 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB40CQ96S21 AKAP8P1-201ENST00000434743 1349 ntBASIC12.48□□□□□ -0.41
RAB40CQ96S21 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB40CQ96S21 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.48□□□□□ -0.41
RAB40CQ96S21 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
RAB40CQ96S21 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB40CQ96S21 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
RAB40CQ96S21 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB40CQ96S21 HLA-H-201ENST00000383620 1096 ntBASIC12.48□□□□□ -0.41
RAB40CQ96S21 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.48□□□□□ -0.41
RAB40CQ96S21 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC12.48□□□□□ -0.41
RAB40CQ96S21 AC112191.1-201ENST00000523689 701 ntBASIC12.48□□□□□ -0.41
RAB40CQ96S21 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.48□□□□□ -0.41
RAB40CQ96S21 SUOX-214ENST00000551841 906 ntTSL 3 BASIC12.48□□□□□ -0.41
RAB40CQ96S21 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC12.48□□□□□ -0.41
RAB40CQ96S21 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC12.48□□□□□ -0.41
RAB40CQ96S21 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.48□□□□□ -0.41
RAB40CQ96S21 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.48□□□□□ -0.41
RAB40CQ96S21 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC12.48□□□□□ -0.41
RAB40CQ96S21 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.48□□□□□ -0.41
RAB40CQ96S21 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
RAB40CQ96S21 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB40CQ96S21 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC12.48□□□□□ -0.41
RAB40CQ96S21 AC004877.2-201ENST00000623941 599 ntBASIC12.48□□□□□ -0.41
RAB40CQ96S21 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB40CQ96S21 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB40CQ96S21 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB40CQ96S21 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.48□□□□□ -0.41
RAB40CQ96S21 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
RAB40CQ96S21 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB40CQ96S21 MBLAC2-202ENST00000514906 1936 ntBASIC12.48□□□□□ -0.41
RAB40CQ96S21 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB40CQ96S21 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB40CQ96S21 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB40CQ96S21 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RAB40CQ96S21 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
RAB40CQ96S21 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RAB40CQ96S21 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB40CQ96S21 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
RAB40CQ96S21 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RAB40CQ96S21 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB40CQ96S21 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
RAB40CQ96S21 PEG13-201ENST00000631594 5667 ntBASIC12.48□□□□□ -0.41
RAB40CQ96S21 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB40CQ96S21 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
RAB40CQ96S21 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.48□□□□□ -0.41
RAB40CQ96S21 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
RAB40CQ96S21 AL137784.3-201ENST00000623858 2288 ntBASIC12.48□□□□□ -0.41
RAB40CQ96S21 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RAB40CQ96S21 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB40CQ96S21 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB40CQ96S21 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB40CQ96S21 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
RAB40CQ96S21 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB40CQ96S21 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB40CQ96S21 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB40CQ96S21 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.47□□□□□ -0.41
RAB40CQ96S21 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RAB40CQ96S21 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
RAB40CQ96S21 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
RAB40CQ96S21 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB40CQ96S21 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.47□□□□□ -0.41
RAB40CQ96S21 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RAB40CQ96S21 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB40CQ96S21 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RAB40CQ96S21 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB40CQ96S21 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
RAB40CQ96S21 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC12.47□□□□□ -0.41
RAB40CQ96S21 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC12.47□□□□□ -0.41
RAB40CQ96S21 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RAB40CQ96S21 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.47□□□□□ -0.41
RAB40CQ96S21 AC142381.1-201ENST00000426099 345 ntBASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms