Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC18.11■□□□□ 0.49
NEK1Q96PY6 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NEK1Q96PY6 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
NEK1Q96PY6 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NEK1Q96PY6 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NEK1Q96PY6 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NEK1Q96PY6 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NEK1Q96PY6 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.11■□□□□ 0.49
NEK1Q96PY6 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC18.11■□□□□ 0.49
NEK1Q96PY6 AL645937.2-201ENST00000396808 931 ntBASIC18.11■□□□□ 0.49
NEK1Q96PY6 C1QBPP1-201ENST00000400117 770 ntBASIC18.11■□□□□ 0.49
NEK1Q96PY6 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.11■□□□□ 0.49
NEK1Q96PY6 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC18.11■□□□□ 0.49
NEK1Q96PY6 HLA-K-203ENST00000430151 1046 ntBASIC18.11■□□□□ 0.49
NEK1Q96PY6 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.11■□□□□ 0.49
NEK1Q96PY6 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.11■□□□□ 0.49
NEK1Q96PY6 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.11■□□□□ 0.49
NEK1Q96PY6 TERF1P3-201ENST00000505638 1227 ntBASIC18.11■□□□□ 0.49
NEK1Q96PY6 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.11■□□□□ 0.49
NEK1Q96PY6 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NEK1Q96PY6 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.11■□□□□ 0.49
NEK1Q96PY6 AC007431.3-201ENST00000623221 587 ntBASIC18.11■□□□□ 0.49
NEK1Q96PY6 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NEK1Q96PY6 KRT8P22-201ENST00000562317 1415 ntBASIC18.11■□□□□ 0.49
NEK1Q96PY6 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NEK1Q96PY6 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NEK1Q96PY6 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NEK1Q96PY6 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NEK1Q96PY6 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NEK1Q96PY6 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC18.11■□□□□ 0.49
NEK1Q96PY6 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NEK1Q96PY6 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NEK1Q96PY6 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NEK1Q96PY6 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NEK1Q96PY6 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
NEK1Q96PY6 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NEK1Q96PY6 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NEK1Q96PY6 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NEK1Q96PY6 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
NEK1Q96PY6 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NEK1Q96PY6 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC18.1■□□□□ 0.49
NEK1Q96PY6 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NEK1Q96PY6 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
NEK1Q96PY6 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC18.1■□□□□ 0.49
NEK1Q96PY6 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC18.1■□□□□ 0.49
NEK1Q96PY6 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NEK1Q96PY6 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NEK1Q96PY6 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC18.1■□□□□ 0.49
NEK1Q96PY6 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NEK1Q96PY6 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NEK1Q96PY6 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
NEK1Q96PY6 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NEK1Q96PY6 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NEK1Q96PY6 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NEK1Q96PY6 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NEK1Q96PY6 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NEK1Q96PY6 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.1■□□□□ 0.49
NEK1Q96PY6 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
NEK1Q96PY6 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NEK1Q96PY6 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.1■□□□□ 0.49
NEK1Q96PY6 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.1■□□□□ 0.49
NEK1Q96PY6 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.1■□□□□ 0.49
NEK1Q96PY6 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.1■□□□□ 0.49
NEK1Q96PY6 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.1■□□□□ 0.49
NEK1Q96PY6 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC18.1■□□□□ 0.49
NEK1Q96PY6 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.1■□□□□ 0.49
NEK1Q96PY6 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.1■□□□□ 0.49
NEK1Q96PY6 SPDYE22P-201ENST00000582158 798 ntBASIC18.1■□□□□ 0.49
NEK1Q96PY6 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.1■□□□□ 0.49
NEK1Q96PY6 BX539320.1-201ENST00000623759 877 ntBASIC18.1■□□□□ 0.49
NEK1Q96PY6 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NEK1Q96PY6 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NEK1Q96PY6 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NEK1Q96PY6 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NEK1Q96PY6 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC18.1■□□□□ 0.49
NEK1Q96PY6 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NEK1Q96PY6 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NEK1Q96PY6 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.1■□□□□ 0.49
NEK1Q96PY6 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NEK1Q96PY6 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NEK1Q96PY6 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.1■□□□□ 0.49
NEK1Q96PY6 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NEK1Q96PY6 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC18.1■□□□□ 0.49
NEK1Q96PY6 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NEK1Q96PY6 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
NEK1Q96PY6 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NEK1Q96PY6 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NEK1Q96PY6 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
NEK1Q96PY6 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC18.1■□□□□ 0.49
NEK1Q96PY6 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
NEK1Q96PY6 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NEK1Q96PY6 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NEK1Q96PY6 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
NEK1Q96PY6 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC18.09■□□□□ 0.49
NEK1Q96PY6 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC18.09■□□□□ 0.49
NEK1Q96PY6 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC18.09■□□□□ 0.49
NEK1Q96PY6 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NEK1Q96PY6 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
NEK1Q96PY6 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NEK1Q96PY6 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms