Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
NSMCE2Q96MF7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.51□□□□□ -0.09
NSMCE2Q96MF7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
NSMCE2Q96MF7 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.51□□□□□ -0.09
NSMCE2Q96MF7 KRT18P56-201ENST00000507275 550 ntBASIC14.51□□□□□ -0.09
NSMCE2Q96MF7 RNA5SP419-201ENST00000515908 135 ntBASIC14.51□□□□□ -0.09
NSMCE2Q96MF7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.51□□□□□ -0.09
NSMCE2Q96MF7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NSMCE2Q96MF7 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
NSMCE2Q96MF7 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NSMCE2Q96MF7 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.51□□□□□ -0.09
NSMCE2Q96MF7 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
NSMCE2Q96MF7 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
NSMCE2Q96MF7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NSMCE2Q96MF7 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NSMCE2Q96MF7 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NSMCE2Q96MF7 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NSMCE2Q96MF7 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
NSMCE2Q96MF7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NSMCE2Q96MF7 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NSMCE2Q96MF7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.51□□□□□ -0.09
NSMCE2Q96MF7 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NSMCE2Q96MF7 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
NSMCE2Q96MF7 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NSMCE2Q96MF7 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NSMCE2Q96MF7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
NSMCE2Q96MF7 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NSMCE2Q96MF7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.51□□□□□ -0.09
NSMCE2Q96MF7 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.51□□□□□ -0.09
NSMCE2Q96MF7 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.51□□□□□ -0.09
NSMCE2Q96MF7 REXO1L4P-201ENST00000605109 1937 ntBASIC14.51□□□□□ -0.09
NSMCE2Q96MF7 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 AC015802.1-201ENST00000588104 1449 ntBASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 AC104109.2-201ENST00000602919 1418 ntBASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 FAAHP1-202ENST00000446499 1238 ntBASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 IGHV3-62-201ENST00000520057 340 ntBASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 AC034105.1-201ENST00000563488 319 ntBASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 AP3S2-216ENST00000617003 1561 ntBASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NSMCE2Q96MF7 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
NSMCE2Q96MF7 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NSMCE2Q96MF7 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.49□□□□□ -0.09
NSMCE2Q96MF7 AL359881.3-201ENST00000602640 1721 ntBASIC14.49□□□□□ -0.09
NSMCE2Q96MF7 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
NSMCE2Q96MF7 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
NSMCE2Q96MF7 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NSMCE2Q96MF7 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
NSMCE2Q96MF7 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NSMCE2Q96MF7 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NSMCE2Q96MF7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NSMCE2Q96MF7 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.49□□□□□ -0.09
NSMCE2Q96MF7 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NSMCE2Q96MF7 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms