Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ALPK3Q96L96 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ALPK3Q96L96 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.18■□□□□ 0.18
ALPK3Q96L96 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ALPK3Q96L96 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ALPK3Q96L96 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
ALPK3Q96L96 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ALPK3Q96L96 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ALPK3Q96L96 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ALPK3Q96L96 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ALPK3Q96L96 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
ALPK3Q96L96 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC16.17■□□□□ 0.18
ALPK3Q96L96 RPL5P21-201ENST00000404620 815 ntBASIC16.17■□□□□ 0.18
ALPK3Q96L96 RGS5-216ENST00000449680 788 ntTSL 3 BASIC16.17■□□□□ 0.18
ALPK3Q96L96 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC16.17■□□□□ 0.18
ALPK3Q96L96 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC16.17■□□□□ 0.18
ALPK3Q96L96 AC083801.1-201ENST00000491689 358 ntBASIC16.17■□□□□ 0.18
ALPK3Q96L96 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC16.17■□□□□ 0.18
ALPK3Q96L96 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC16.17■□□□□ 0.18
ALPK3Q96L96 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
ALPK3Q96L96 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC16.17■□□□□ 0.18
ALPK3Q96L96 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.17■□□□□ 0.18
ALPK3Q96L96 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
ALPK3Q96L96 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
ALPK3Q96L96 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
ALPK3Q96L96 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ALPK3Q96L96 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ALPK3Q96L96 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
ALPK3Q96L96 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.17■□□□□ 0.18
ALPK3Q96L96 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.17■□□□□ 0.18
ALPK3Q96L96 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ALPK3Q96L96 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ALPK3Q96L96 AC004554.1-201ENST00000422830 1468 ntBASIC16.17■□□□□ 0.18
ALPK3Q96L96 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
ALPK3Q96L96 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ALPK3Q96L96 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ALPK3Q96L96 KRT17P5-201ENST00000332088 839 ntBASIC16.17■□□□□ 0.18
ALPK3Q96L96 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ALPK3Q96L96 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC16.17■□□□□ 0.18
ALPK3Q96L96 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC16.17■□□□□ 0.18
ALPK3Q96L96 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ALPK3Q96L96 ERP29P1-201ENST00000442902 706 ntBASIC16.17■□□□□ 0.18
ALPK3Q96L96 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC16.17■□□□□ 0.18
ALPK3Q96L96 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC16.17■□□□□ 0.18
ALPK3Q96L96 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ALPK3Q96L96 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ALPK3Q96L96 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ALPK3Q96L96 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ALPK3Q96L96 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
ALPK3Q96L96 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.16■□□□□ 0.18
ALPK3Q96L96 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
ALPK3Q96L96 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ALPK3Q96L96 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.16■□□□□ 0.18
ALPK3Q96L96 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ALPK3Q96L96 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
ALPK3Q96L96 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ALPK3Q96L96 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC16.16■□□□□ 0.18
ALPK3Q96L96 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.16■□□□□ 0.18
ALPK3Q96L96 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.16■□□□□ 0.18
ALPK3Q96L96 REXO1L2P-201ENST00000425429 2069 ntBASIC16.16■□□□□ 0.18
ALPK3Q96L96 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ALPK3Q96L96 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ALPK3Q96L96 PTGER4P2-201ENST00000328411 252 ntBASIC16.16■□□□□ 0.18
ALPK3Q96L96 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
ALPK3Q96L96 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ALPK3Q96L96 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ALPK3Q96L96 AL929302.1-201ENST00000426556 871 ntBASIC16.16■□□□□ 0.18
ALPK3Q96L96 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.16■□□□□ 0.18
ALPK3Q96L96 PTGER4P3-201ENST00000458150 252 ntBASIC16.16■□□□□ 0.18
ALPK3Q96L96 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC16.16■□□□□ 0.18
ALPK3Q96L96 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
ALPK3Q96L96 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ALPK3Q96L96 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ALPK3Q96L96 AC006548.2-201ENST00000605217 529 ntBASIC16.16■□□□□ 0.18
ALPK3Q96L96 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.16■□□□□ 0.18
ALPK3Q96L96 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC16.16■□□□□ 0.18
ALPK3Q96L96 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
ALPK3Q96L96 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
ALPK3Q96L96 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
ALPK3Q96L96 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
ALPK3Q96L96 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
ALPK3Q96L96 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
ALPK3Q96L96 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
ALPK3Q96L96 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
ALPK3Q96L96 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
ALPK3Q96L96 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
ALPK3Q96L96 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
ALPK3Q96L96 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ALPK3Q96L96 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
ALPK3Q96L96 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ALPK3Q96L96 TMBIM7P-202ENST00000641474 1516 ntBASIC16.16■□□□□ 0.18
ALPK3Q96L96 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ALPK3Q96L96 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
ALPK3Q96L96 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ALPK3Q96L96 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ALPK3Q96L96 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ALPK3Q96L96 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.16■□□□□ 0.18
ALPK3Q96L96 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.16■□□□□ 0.18
ALPK3Q96L96 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC16.16■□□□□ 0.18
ALPK3Q96L96 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms