Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AC036164.1-201ENST00000570544 333 ntBASIC18.23■□□□□ 0.51
DDX11Q96FC9 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.23■□□□□ 0.51
DDX11Q96FC9 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
DDX11Q96FC9 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.23■□□□□ 0.51
DDX11Q96FC9 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
DDX11Q96FC9 AC106881.1-201ENST00000605849 3329 ntBASIC18.23■□□□□ 0.51
DDX11Q96FC9 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DDX11Q96FC9 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DDX11Q96FC9 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
DDX11Q96FC9 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DDX11Q96FC9 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DDX11Q96FC9 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
DDX11Q96FC9 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC18.23■□□□□ 0.51
DDX11Q96FC9 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.23■□□□□ 0.51
DDX11Q96FC9 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
DDX11Q96FC9 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
DDX11Q96FC9 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
DDX11Q96FC9 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.23■□□□□ 0.51
DDX11Q96FC9 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DDX11Q96FC9 AL161772.1-201ENST00000610494 4412 ntBASIC18.22■□□□□ 0.51
DDX11Q96FC9 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
DDX11Q96FC9 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX11Q96FC9 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.22■□□□□ 0.51
DDX11Q96FC9 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
DDX11Q96FC9 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX11Q96FC9 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX11Q96FC9 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX11Q96FC9 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX11Q96FC9 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC18.22■□□□□ 0.51
DDX11Q96FC9 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.22■□□□□ 0.51
DDX11Q96FC9 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
DDX11Q96FC9 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.22■□□□□ 0.51
DDX11Q96FC9 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.22■□□□□ 0.51
DDX11Q96FC9 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
DDX11Q96FC9 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
DDX11Q96FC9 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX11Q96FC9 SLED1-202ENST00000512051 380 ntBASIC18.22■□□□□ 0.51
DDX11Q96FC9 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
DDX11Q96FC9 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.22■□□□□ 0.51
DDX11Q96FC9 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.22■□□□□ 0.51
DDX11Q96FC9 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX11Q96FC9 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.22■□□□□ 0.51
DDX11Q96FC9 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.22■□□□□ 0.51
DDX11Q96FC9 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.22■□□□□ 0.51
DDX11Q96FC9 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
DDX11Q96FC9 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX11Q96FC9 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.22■□□□□ 0.51
DDX11Q96FC9 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
DDX11Q96FC9 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.22■□□□□ 0.51
DDX11Q96FC9 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
DDX11Q96FC9 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC18.22■□□□□ 0.51
DDX11Q96FC9 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX11Q96FC9 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
DDX11Q96FC9 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX11Q96FC9 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
DDX11Q96FC9 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
DDX11Q96FC9 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.22■□□□□ 0.51
DDX11Q96FC9 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX11Q96FC9 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
DDX11Q96FC9 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX11Q96FC9 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DDX11Q96FC9 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
DDX11Q96FC9 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DDX11Q96FC9 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
DDX11Q96FC9 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
DDX11Q96FC9 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
DDX11Q96FC9 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
DDX11Q96FC9 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DDX11Q96FC9 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
DDX11Q96FC9 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DDX11Q96FC9 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
DDX11Q96FC9 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
DDX11Q96FC9 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
DDX11Q96FC9 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
DDX11Q96FC9 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DDX11Q96FC9 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
DDX11Q96FC9 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DDX11Q96FC9 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.21■□□□□ 0.51
DDX11Q96FC9 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.21■□□□□ 0.51
DDX11Q96FC9 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.21■□□□□ 0.51
DDX11Q96FC9 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.21■□□□□ 0.51
DDX11Q96FC9 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.21■□□□□ 0.51
DDX11Q96FC9 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.21■□□□□ 0.51
DDX11Q96FC9 AC015936.2-201ENST00000593177 259 ntBASIC18.21■□□□□ 0.51
DDX11Q96FC9 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
DDX11Q96FC9 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.21■□□□□ 0.51
DDX11Q96FC9 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
DDX11Q96FC9 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC18.21■□□□□ 0.51
DDX11Q96FC9 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DDX11Q96FC9 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.21■□□□□ 0.51
DDX11Q96FC9 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC18.21■□□□□ 0.51
DDX11Q96FC9 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
DDX11Q96FC9 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DDX11Q96FC9 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DDX11Q96FC9 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DDX11Q96FC9 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DDX11Q96FC9 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
DDX11Q96FC9 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC18.21■□□□□ 0.5
DDX11Q96FC9 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
DDX11Q96FC9 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms