Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
USP9XQ93008 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
USP9XQ93008 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
USP9XQ93008 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
USP9XQ93008 BAK1P1-201ENST00000317045 636 ntBASIC13.08□□□□□ -0.32
USP9XQ93008 AL807761.2-201ENST00000422849 729 ntBASIC13.08□□□□□ -0.32
USP9XQ93008 DUTP3-201ENST00000450025 415 ntBASIC13.08□□□□□ -0.32
USP9XQ93008 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.08□□□□□ -0.32
USP9XQ93008 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC13.08□□□□□ -0.32
USP9XQ93008 AC142086.5-202ENST00000562500 217 ntBASIC13.08□□□□□ -0.32
USP9XQ93008 AC100827.2-201ENST00000563214 1194 ntBASIC13.08□□□□□ -0.32
USP9XQ93008 AC011471.3-201ENST00000623576 402 ntBASIC13.08□□□□□ -0.32
USP9XQ93008 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
USP9XQ93008 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
USP9XQ93008 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
USP9XQ93008 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.08□□□□□ -0.32
USP9XQ93008 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
USP9XQ93008 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
USP9XQ93008 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.08□□□□□ -0.32
USP9XQ93008 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.08□□□□□ -0.32
USP9XQ93008 FRMPD2B-201ENST00000431305 1347 ntBASIC13.08□□□□□ -0.32
USP9XQ93008 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
USP9XQ93008 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
USP9XQ93008 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
USP9XQ93008 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.08□□□□□ -0.32
USP9XQ93008 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
USP9XQ93008 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
USP9XQ93008 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC13.08□□□□□ -0.32
USP9XQ93008 AC108724.1-201ENST00000481669 352 ntBASIC13.08□□□□□ -0.32
USP9XQ93008 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC13.08□□□□□ -0.32
USP9XQ93008 AC055811.3-201ENST00000584952 686 ntBASIC13.08□□□□□ -0.32
USP9XQ93008 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
USP9XQ93008 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.08□□□□□ -0.32
USP9XQ93008 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.08□□□□□ -0.32
USP9XQ93008 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
USP9XQ93008 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
USP9XQ93008 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.08□□□□□ -0.32
USP9XQ93008 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
USP9XQ93008 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
USP9XQ93008 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
USP9XQ93008 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
USP9XQ93008 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
USP9XQ93008 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
USP9XQ93008 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.07□□□□□ -0.32
USP9XQ93008 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.07□□□□□ -0.32
USP9XQ93008 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
USP9XQ93008 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
USP9XQ93008 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.07□□□□□ -0.32
USP9XQ93008 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
USP9XQ93008 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
USP9XQ93008 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
USP9XQ93008 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.07□□□□□ -0.32
USP9XQ93008 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
USP9XQ93008 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
USP9XQ93008 AL592076.1-201ENST00000424448 303 ntBASIC13.07□□□□□ -0.32
USP9XQ93008 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
USP9XQ93008 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.07□□□□□ -0.32
USP9XQ93008 AC090820.1-201ENST00000519722 591 ntBASIC13.07□□□□□ -0.32
USP9XQ93008 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.07□□□□□ -0.32
USP9XQ93008 AP005212.2-201ENST00000584979 510 ntBASIC13.07□□□□□ -0.32
USP9XQ93008 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC13.07□□□□□ -0.32
USP9XQ93008 AC009884.2-201ENST00000603110 324 ntBASIC13.07□□□□□ -0.32
USP9XQ93008 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
USP9XQ93008 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
USP9XQ93008 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
USP9XQ93008 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
USP9XQ93008 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
USP9XQ93008 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
USP9XQ93008 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC13.07□□□□□ -0.32
USP9XQ93008 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
USP9XQ93008 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
USP9XQ93008 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.07□□□□□ -0.32
USP9XQ93008 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.07□□□□□ -0.32
USP9XQ93008 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
USP9XQ93008 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
USP9XQ93008 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
USP9XQ93008 PCDH8P1-201ENST00000428983 2773 ntBASIC13.07□□□□□ -0.32
USP9XQ93008 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
USP9XQ93008 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
USP9XQ93008 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
USP9XQ93008 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
USP9XQ93008 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
USP9XQ93008 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
USP9XQ93008 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC13.07□□□□□ -0.32
USP9XQ93008 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
USP9XQ93008 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.07□□□□□ -0.32
USP9XQ93008 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC13.07□□□□□ -0.32
USP9XQ93008 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC13.07□□□□□ -0.32
USP9XQ93008 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC13.07□□□□□ -0.32
USP9XQ93008 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
USP9XQ93008 DPY19L2P5-201ENST00000456300 331 ntBASIC13.07□□□□□ -0.32
USP9XQ93008 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC13.07□□□□□ -0.32
USP9XQ93008 AREG-202ENST00000502307 956 ntTSL 5 BASIC13.07□□□□□ -0.32
USP9XQ93008 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.07□□□□□ -0.32
USP9XQ93008 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.07□□□□□ -0.32
USP9XQ93008 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC13.07□□□□□ -0.32
USP9XQ93008 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC13.07□□□□□ -0.32
USP9XQ93008 MIR3180-2-201ENST00000581748 88 ntBASIC13.07□□□□□ -0.32
USP9XQ93008 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
USP9XQ93008 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms