Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 REXO1L5P-201ENST00000622260 2098 ntBASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 AL158070.2-201ENST00000623713 1621 ntBASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 HLA-K-203ENST00000430151 1046 ntBASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 DFFBP1-201ENST00000433250 979 ntBASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 AC244107.1-201ENST00000442033 332 ntBASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 CHCHD2P3-201ENST00000603038 451 ntBASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 AL390755.1-201ENST00000623716 2027 ntBASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDH19Q8TAB3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 AC120045.2-201ENST00000567334 178 ntBASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 AC140912.1-201ENST00000577171 1054 ntBASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 AC093813.1-201ENST00000605066 256 ntBASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 AC093726.1-201ENST00000608064 963 ntBASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 AL513477.1-201ENST00000602865 2407 ntBASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 AC068418.2-201ENST00000577309 3703 ntBASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDH19Q8TAB3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 INTS4P2-202ENST00000614726 2019 ntBASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PCDH19Q8TAB3 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms