Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 AL035633.1-201ENST00000406139 838 ntBASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 AC011495.1-201ENST00000498085 584 ntBASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 AP001582.1-201ENST00000525856 295 ntBASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC148Q8NFR7 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 AL158070.2-201ENST00000623713 1621 ntBASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC148Q8NFR7 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
CCDC148Q8NFR7 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC148Q8NFR7 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC148Q8NFR7 TNRC18P2-201ENST00000417666 2714 ntBASIC17.64■□□□□ 0.42
CCDC148Q8NFR7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC148Q8NFR7 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC148Q8NFR7 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC148Q8NFR7 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CCDC148Q8NFR7 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCDC148Q8NFR7 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC148Q8NFR7 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CCDC148Q8NFR7 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC148Q8NFR7 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCDC148Q8NFR7 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC148Q8NFR7 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC148Q8NFR7 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC148Q8NFR7 COX20P2-201ENST00000452636 358 ntBASIC17.64■□□□□ 0.41
CCDC148Q8NFR7 RN7SL752P-201ENST00000463779 287 ntBASIC17.64■□□□□ 0.41
CCDC148Q8NFR7 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC148Q8NFR7 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC148Q8NFR7 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC148Q8NFR7 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC148Q8NFR7 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC148Q8NFR7 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms