Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 MTHFR-210ENST00000641407 2387 ntBASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 FO393414.2-201ENST00000405153 598 ntBASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 AZGP1P1-201ENST00000411909 902 ntBASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 CEND1P1-201ENST00000451006 455 ntBASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 AC022145.2-201ENST00000598203 171 ntBASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 WASH3P-207ENST00000560956 1394 ntBASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 FO538757.1-201ENST00000623083 1397 ntBASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
DNAAF1Q8NEP3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
DNAAF1Q8NEP3 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.54□□□□□ -0.24
DNAAF1Q8NEP3 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
DNAAF1Q8NEP3 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.54□□□□□ -0.24
DNAAF1Q8NEP3 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
DNAAF1Q8NEP3 AC006504.5-208ENST00000588784 2401 ntBASIC13.54□□□□□ -0.24
DNAAF1Q8NEP3 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
DNAAF1Q8NEP3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
DNAAF1Q8NEP3 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
DNAAF1Q8NEP3 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
DNAAF1Q8NEP3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
DNAAF1Q8NEP3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.54□□□□□ -0.24
DNAAF1Q8NEP3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.54□□□□□ -0.24
DNAAF1Q8NEP3 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.54□□□□□ -0.24
DNAAF1Q8NEP3 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
DNAAF1Q8NEP3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.54□□□□□ -0.24
DNAAF1Q8NEP3 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
DNAAF1Q8NEP3 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
DNAAF1Q8NEP3 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
DNAAF1Q8NEP3 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
DNAAF1Q8NEP3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms