Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 AL391005.1-201ENST00000623953 2435 ntBASIC16.15■□□□□ 0.18
TTC16Q8NEE8 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 BRWD1P1-201ENST00000401091 371 ntBASIC16.15■□□□□ 0.18
TTC16Q8NEE8 DRD5P1-201ENST00000456605 1438 ntBASIC16.15■□□□□ 0.18
TTC16Q8NEE8 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 AP001063.1-201ENST00000568332 529 ntBASIC16.15■□□□□ 0.18
TTC16Q8NEE8 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
TTC16Q8NEE8 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.14■□□□□ 0.18
TTC16Q8NEE8 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 FAM86MP-201ENST00000340703 885 ntBASIC16.14■□□□□ 0.17
TTC16Q8NEE8 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 AC005229.1-201ENST00000392885 409 ntBASIC16.14■□□□□ 0.17
TTC16Q8NEE8 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TTC16Q8NEE8 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TTC16Q8NEE8 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TTC16Q8NEE8 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TTC16Q8NEE8 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TTC16Q8NEE8 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TTC16Q8NEE8 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TTC16Q8NEE8 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TTC16Q8NEE8 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.13■□□□□ 0.17
TTC16Q8NEE8 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TTC16Q8NEE8 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TTC16Q8NEE8 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TTC16Q8NEE8 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TTC16Q8NEE8 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TTC16Q8NEE8 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.13■□□□□ 0.17
TTC16Q8NEE8 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TTC16Q8NEE8 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.13■□□□□ 0.17
TTC16Q8NEE8 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
TTC16Q8NEE8 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TTC16Q8NEE8 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TTC16Q8NEE8 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TTC16Q8NEE8 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TTC16Q8NEE8 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TTC16Q8NEE8 AL133267.1-201ENST00000398220 340 ntBASIC16.13■□□□□ 0.17
TTC16Q8NEE8 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.13■□□□□ 0.17
TTC16Q8NEE8 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.13■□□□□ 0.17
TTC16Q8NEE8 AC099336.1-201ENST00000417053 1171 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms