Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 GATB-213ENST00000515812 1893 ntTSL 5 BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 BCAS2P2-201ENST00000425064 674 ntBASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 TSPY25P-201ENST00000429463 745 ntBASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 EIF3FP3-201ENST00000434851 1086 ntBASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 RN7SL258P-201ENST00000478664 300 ntBASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 POLD4-208ENST00000532830 904 ntTSL 3 BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
CCDC168Q8NDH2 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
CCDC168Q8NDH2 CLUHP2-201ENST00000426660 1303 ntBASIC12.65□□□□□ -0.39
CCDC168Q8NDH2 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC12.65□□□□□ -0.39
CCDC168Q8NDH2 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 SNX15-201ENST00000352068 771 ntTSL 5 BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 AL645937.2-201ENST00000396808 931 ntBASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 MIR4472-1-201ENST00000584349 80 ntBASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 AC002472.4-201ENST00000641915 272 ntBASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 SHC1P1-201ENST00000425230 1745 ntBASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 MESTP3-201ENST00000503460 968 ntBASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 AC090857.1-201ENST00000527400 390 ntBASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 MIR4313-201ENST00000580760 101 ntBASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 AC004686.1-201ENST00000605113 538 ntBASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 MIR6769A-201ENST00000617340 73 ntBASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CCDC168Q8NDH2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms