Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 TTTY23B-201ENST00000442790 549 ntBASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 USP32P1-208ENST00000506594 1164 ntBASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 KRT18P25-201ENST00000508931 1278 ntBASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 AC022616.1-201ENST00000518688 554 ntBASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 SLC25A47P1-201ENST00000531577 414 ntBASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 AC008735.3-201ENST00000596646 500 ntBASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 AJ011931.1-201ENST00000618749 2492 ntBASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
ZIC4Q8N9L1 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 KRT8P35-201ENST00000483942 1338 ntBASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 GIMAP3P-201ENST00000495150 836 ntBASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 AC015936.2-201ENST00000593177 259 ntBASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms