Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL27A1Q8IZC6 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL27A1Q8IZC6 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL27A1Q8IZC6 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
COL27A1Q8IZC6 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14□□□□□ -0.17
COL27A1Q8IZC6 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14□□□□□ -0.17
COL27A1Q8IZC6 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
COL27A1Q8IZC6 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL27A1Q8IZC6 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL27A1Q8IZC6 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
COL27A1Q8IZC6 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL27A1Q8IZC6 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL27A1Q8IZC6 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
COL27A1Q8IZC6 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL27A1Q8IZC6 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL27A1Q8IZC6 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL27A1Q8IZC6 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL27A1Q8IZC6 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL27A1Q8IZC6 RPL8P2-201ENST00000430538 502 ntBASIC14□□□□□ -0.17
COL27A1Q8IZC6 PIN4P1-201ENST00000451079 396 ntBASIC14□□□□□ -0.17
COL27A1Q8IZC6 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14□□□□□ -0.17
COL27A1Q8IZC6 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14□□□□□ -0.17
COL27A1Q8IZC6 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL27A1Q8IZC6 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14□□□□□ -0.17
COL27A1Q8IZC6 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC14□□□□□ -0.17
COL27A1Q8IZC6 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
COL27A1Q8IZC6 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
COL27A1Q8IZC6 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
COL27A1Q8IZC6 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14□□□□□ -0.17
COL27A1Q8IZC6 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL27A1Q8IZC6 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14□□□□□ -0.17
COL27A1Q8IZC6 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL27A1Q8IZC6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
COL27A1Q8IZC6 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL27A1Q8IZC6 AC025271.4-201ENST00000621477 1726 ntBASIC14□□□□□ -0.17
COL27A1Q8IZC6 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL27A1Q8IZC6 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC14□□□□□ -0.17
COL27A1Q8IZC6 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
COL27A1Q8IZC6 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL27A1Q8IZC6 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14□□□□□ -0.17
COL27A1Q8IZC6 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14□□□□□ -0.17
COL27A1Q8IZC6 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14□□□□□ -0.17
COL27A1Q8IZC6 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL27A1Q8IZC6 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14□□□□□ -0.17
COL27A1Q8IZC6 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL27A1Q8IZC6 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL27A1Q8IZC6 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14□□□□□ -0.17
COL27A1Q8IZC6 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 TSPY25P-201ENST00000429463 745 ntBASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 RPSAP15-201ENST00000448168 861 ntBASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 CD164-210ENST00000512821 964 ntTSL 2 BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 TPM1-223ENST00000560445 485 ntTSL 3 BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 AC107464.3-201ENST00000609172 737 ntBASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
COL27A1Q8IZC6 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms