Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 AC055811.4-201ENST00000624039 1754 ntBASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
C9orf40Q8IXQ3 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
C9orf40Q8IXQ3 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.08□□□□□ -0.15
C9orf40Q8IXQ3 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.08□□□□□ -0.15
C9orf40Q8IXQ3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 AC007551.1-201ENST00000457394 519 ntBASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 DUX4L47-201ENST00000566374 394 ntBASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 PDIA3P1-201ENST00000471856 1510 ntBASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 AGAP7P-201ENST00000582299 2062 ntBASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 AGAP14-201ENST00000624701 2060 ntBASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
C9orf40Q8IXQ3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 ZBED1P1-201ENST00000502364 1930 ntBASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 GK-202ENST00000378941 458 ntTSL 3 BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 BOLA2P3-201ENST00000404566 256 ntBASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 MIR1909-201ENST00000411312 80 ntBASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 ARSEP1-201ENST00000420443 635 ntBASIC14.07□□□□□ -0.16
C9orf40Q8IXQ3 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms