Protein–RNA interactions for Protein: Q86YV9

HPS6, Hermansky-Pudlak syndrome 6 protein, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6Q86YV9 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HPS6Q86YV9 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HPS6Q86YV9 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
HPS6Q86YV9 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.21■□□□□ 0.02
HPS6Q86YV9 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HPS6Q86YV9 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.21■□□□□ 0.02
HPS6Q86YV9 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
HPS6Q86YV9 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.21■□□□□ 0.02
HPS6Q86YV9 CETN4P-206ENST00000642099 2168 ntBASIC15.21■□□□□ 0.02
HPS6Q86YV9 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.21■□□□□ 0.02
HPS6Q86YV9 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
HPS6Q86YV9 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS6Q86YV9 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HPS6Q86YV9 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HPS6Q86YV9 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
HPS6Q86YV9 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HPS6Q86YV9 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS6Q86YV9 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS6Q86YV9 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
HPS6Q86YV9 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS6Q86YV9 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HPS6Q86YV9 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.2■□□□□ 0.02
HPS6Q86YV9 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HPS6Q86YV9 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HPS6Q86YV9 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS6Q86YV9 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS6Q86YV9 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS6Q86YV9 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HPS6Q86YV9 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.2■□□□□ 0.02
HPS6Q86YV9 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.2■□□□□ 0.02
HPS6Q86YV9 SPTLC1P1-201ENST00000447199 261 ntBASIC15.2■□□□□ 0.02
HPS6Q86YV9 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HPS6Q86YV9 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS6Q86YV9 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.2■□□□□ 0.02
HPS6Q86YV9 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
HPS6Q86YV9 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.2■□□□□ 0.02
HPS6Q86YV9 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HPS6Q86YV9 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS6Q86YV9 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HPS6Q86YV9 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS6Q86YV9 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS6Q86YV9 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.2■□□□□ 0.02
HPS6Q86YV9 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
HPS6Q86YV9 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS6Q86YV9 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS6Q86YV9 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HPS6Q86YV9 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.2■□□□□ 0.02
HPS6Q86YV9 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.2■□□□□ 0.02
HPS6Q86YV9 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HPS6Q86YV9 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS6Q86YV9 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS6Q86YV9 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS6Q86YV9 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
HPS6Q86YV9 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS6Q86YV9 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.2■□□□□ 0.02
HPS6Q86YV9 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.2■□□□□ 0.02
HPS6Q86YV9 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS6Q86YV9 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS6Q86YV9 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
HPS6Q86YV9 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HPS6Q86YV9 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HPS6Q86YV9 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.19■□□□□ 0.02
HPS6Q86YV9 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.19■□□□□ 0.02
HPS6Q86YV9 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HPS6Q86YV9 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HPS6Q86YV9 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HPS6Q86YV9 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HPS6Q86YV9 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HPS6Q86YV9 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HPS6Q86YV9 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.19■□□□□ 0.02
HPS6Q86YV9 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.19■□□□□ 0.02
HPS6Q86YV9 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HPS6Q86YV9 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HPS6Q86YV9 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.19■□□□□ 0.02
HPS6Q86YV9 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HPS6Q86YV9 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HPS6Q86YV9 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HPS6Q86YV9 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.19■□□□□ 0.02
HPS6Q86YV9 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HPS6Q86YV9 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
HPS6Q86YV9 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.19■□□□□ 0.02
HPS6Q86YV9 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HPS6Q86YV9 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HPS6Q86YV9 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HPS6Q86YV9 AC098614.1-201ENST00000368528 745 ntBASIC15.19■□□□□ 0.02
HPS6Q86YV9 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
HPS6Q86YV9 COX5BP8-201ENST00000416911 349 ntBASIC15.19■□□□□ 0.02
HPS6Q86YV9 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.19■□□□□ 0.02
HPS6Q86YV9 AL353779.1-201ENST00000434793 351 ntBASIC15.19■□□□□ 0.02
HPS6Q86YV9 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
HPS6Q86YV9 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.19■□□□□ 0.02
HPS6Q86YV9 AL138918.1-201ENST00000568306 659 ntBASIC15.19■□□□□ 0.02
HPS6Q86YV9 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.19■□□□□ 0.02
HPS6Q86YV9 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HPS6Q86YV9 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
HPS6Q86YV9 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.19■□□□□ 0.02
HPS6Q86YV9 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.19■□□□□ 0.02
HPS6Q86YV9 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.19■□□□□ 0.02
HPS6Q86YV9 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.19■□□□□ 0.02
HPS6Q86YV9 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms