Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AC027237.1-201ENST00000560942 655 ntBASIC18.83■□□□□ 0.6
COL23A1Q86Y22 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC18.83■□□□□ 0.6
COL23A1Q86Y22 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
COL23A1Q86Y22 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC18.83■□□□□ 0.6
COL23A1Q86Y22 ETV2-207ENST00000619399 994 ntTSL 5 BASIC18.83■□□□□ 0.6
COL23A1Q86Y22 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
COL23A1Q86Y22 DDX5-235ENST00000630471 473 ntTSL 4 BASIC18.83■□□□□ 0.6
COL23A1Q86Y22 CASP16P-204ENST00000635032 809 ntBASIC18.83■□□□□ 0.6
COL23A1Q86Y22 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL23A1Q86Y22 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.83■□□□□ 0.6
COL23A1Q86Y22 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL23A1Q86Y22 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COL23A1Q86Y22 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL23A1Q86Y22 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.83■□□□□ 0.6
COL23A1Q86Y22 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
COL23A1Q86Y22 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL23A1Q86Y22 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC18.83■□□□□ 0.6
COL23A1Q86Y22 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
COL23A1Q86Y22 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL23A1Q86Y22 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL23A1Q86Y22 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 AL645933.1-201ENST00000440087 609 ntBASIC18.82■□□□□ 0.6
COL23A1Q86Y22 CICP12-201ENST00000455801 843 ntBASIC18.82■□□□□ 0.6
COL23A1Q86Y22 FTH1P22-201ENST00000456305 520 ntBASIC18.82■□□□□ 0.6
COL23A1Q86Y22 RN7SL396P-201ENST00000471086 295 ntBASIC18.82■□□□□ 0.6
COL23A1Q86Y22 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 AC007326.1-201ENST00000604539 458 ntBASIC18.82■□□□□ 0.6
COL23A1Q86Y22 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 LINC02447-202ENST00000501888 2146 ntBASIC18.82■□□□□ 0.6
COL23A1Q86Y22 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL23A1Q86Y22 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.81■□□□□ 0.6
COL23A1Q86Y22 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL23A1Q86Y22 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL23A1Q86Y22 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL23A1Q86Y22 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.81■□□□□ 0.6
COL23A1Q86Y22 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL23A1Q86Y22 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC18.81■□□□□ 0.6
COL23A1Q86Y22 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL23A1Q86Y22 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.81■□□□□ 0.6
COL23A1Q86Y22 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
COL23A1Q86Y22 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL23A1Q86Y22 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL23A1Q86Y22 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL23A1Q86Y22 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL23A1Q86Y22 RPL5P21-201ENST00000404620 815 ntBASIC18.81■□□□□ 0.6
COL23A1Q86Y22 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC18.81■□□□□ 0.6
COL23A1Q86Y22 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL23A1Q86Y22 RN7SL81P-201ENST00000493781 261 ntBASIC18.81■□□□□ 0.6
COL23A1Q86Y22 ORAOV1P1-201ENST00000503108 395 ntBASIC18.81■□□□□ 0.6
COL23A1Q86Y22 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC18.81■□□□□ 0.6
COL23A1Q86Y22 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
COL23A1Q86Y22 AL118516.1-201ENST00000564152 670 ntBASIC18.81■□□□□ 0.6
COL23A1Q86Y22 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC18.81■□□□□ 0.6
COL23A1Q86Y22 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC18.81■□□□□ 0.6
COL23A1Q86Y22 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC18.81■□□□□ 0.6
COL23A1Q86Y22 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC18.81■□□□□ 0.6
COL23A1Q86Y22 HKR1-225ENST00000592168 566 ntTSL 4 BASIC18.81■□□□□ 0.6
COL23A1Q86Y22 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC18.81■□□□□ 0.6
COL23A1Q86Y22 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC18.81■□□□□ 0.6
COL23A1Q86Y22 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC18.81■□□□□ 0.6
COL23A1Q86Y22 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL23A1Q86Y22 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.81■□□□□ 0.6
COL23A1Q86Y22 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL23A1Q86Y22 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL23A1Q86Y22 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL23A1Q86Y22 KRT8P31-201ENST00000504812 1408 ntBASIC18.81■□□□□ 0.6
COL23A1Q86Y22 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL23A1Q86Y22 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms