Protein–RNA interactions for Protein: Q86WV1

SKAP1, Src kinase-associated phosphoprotein 1, humanhuman

Predictions only

Length 359 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1Q86WV1 AC010336.2-201ENST00000564226 506 ntBASIC19.11■□□□□ 0.65
SKAP1Q86WV1 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SKAP1Q86WV1 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SKAP1Q86WV1 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.11■□□□□ 0.65
SKAP1Q86WV1 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
SKAP1Q86WV1 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SKAP1Q86WV1 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SKAP1Q86WV1 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SKAP1Q86WV1 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SKAP1Q86WV1 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC19.11■□□□□ 0.65
SKAP1Q86WV1 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
SKAP1Q86WV1 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SKAP1Q86WV1 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SKAP1Q86WV1 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SKAP1Q86WV1 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC19.1■□□□□ 0.65
SKAP1Q86WV1 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC19.1■□□□□ 0.65
SKAP1Q86WV1 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SKAP1Q86WV1 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SKAP1Q86WV1 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SKAP1Q86WV1 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SKAP1Q86WV1 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SKAP1Q86WV1 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SKAP1Q86WV1 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SKAP1Q86WV1 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SKAP1Q86WV1 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SKAP1Q86WV1 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SKAP1Q86WV1 AL139400.1-201ENST00000366220 510 ntBASIC19.1■□□□□ 0.65
SKAP1Q86WV1 AC104457.1-201ENST00000401024 814 ntBASIC19.1■□□□□ 0.65
SKAP1Q86WV1 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
SKAP1Q86WV1 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.1■□□□□ 0.65
SKAP1Q86WV1 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SKAP1Q86WV1 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SKAP1Q86WV1 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
SKAP1Q86WV1 AL138828.2-201ENST00000615812 383 ntBASIC19.1■□□□□ 0.65
SKAP1Q86WV1 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC19.1■□□□□ 0.65
SKAP1Q86WV1 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SKAP1Q86WV1 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SKAP1Q86WV1 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SKAP1Q86WV1 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SKAP1Q86WV1 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC19.1■□□□□ 0.65
SKAP1Q86WV1 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SKAP1Q86WV1 AC152010.1-201ENST00000415779 2006 ntBASIC19.1■□□□□ 0.65
SKAP1Q86WV1 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SKAP1Q86WV1 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SKAP1Q86WV1 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SKAP1Q86WV1 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC19.1■□□□□ 0.65
SKAP1Q86WV1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 LILRP1-201ENST00000444199 1370 ntBASIC19.09■□□□□ 0.65
SKAP1Q86WV1 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 PES1-204ENST00000402284 2144 ntTSL 5 BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC19.09■□□□□ 0.65
SKAP1Q86WV1 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 AC138969.3-201ENST00000546612 1459 ntBASIC19.09■□□□□ 0.65
SKAP1Q86WV1 AC138932.2-201ENST00000548268 1459 ntBASIC19.09■□□□□ 0.65
SKAP1Q86WV1 AC126755.4-201ENST00000549796 1459 ntBASIC19.09■□□□□ 0.65
SKAP1Q86WV1 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
SKAP1Q86WV1 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.65
SKAP1Q86WV1 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
SKAP1Q86WV1 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SKAP1Q86WV1 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SKAP1Q86WV1 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SKAP1Q86WV1 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC19.08■□□□□ 0.65
SKAP1Q86WV1 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SKAP1Q86WV1 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SKAP1Q86WV1 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SKAP1Q86WV1 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SKAP1Q86WV1 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SKAP1Q86WV1 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms