Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PACS2Q86VP3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
PACS2Q86VP3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PACS2Q86VP3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PACS2Q86VP3 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PACS2Q86VP3 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PACS2Q86VP3 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
PACS2Q86VP3 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC15.55■□□□□ 0.08
PACS2Q86VP3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PACS2Q86VP3 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PACS2Q86VP3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
PACS2Q86VP3 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PACS2Q86VP3 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.55■□□□□ 0.08
PACS2Q86VP3 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PACS2Q86VP3 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC15.55■□□□□ 0.08
PACS2Q86VP3 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PACS2Q86VP3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.55■□□□□ 0.08
PACS2Q86VP3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PACS2Q86VP3 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.55■□□□□ 0.08
PACS2Q86VP3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.55■□□□□ 0.08
PACS2Q86VP3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PACS2Q86VP3 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PACS2Q86VP3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
PACS2Q86VP3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.55■□□□□ 0.08
PACS2Q86VP3 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PACS2Q86VP3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.55■□□□□ 0.08
PACS2Q86VP3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PACS2Q86VP3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.55■□□□□ 0.08
PACS2Q86VP3 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.55■□□□□ 0.08
PACS2Q86VP3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.55■□□□□ 0.08
PACS2Q86VP3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.55■□□□□ 0.08
PACS2Q86VP3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.55■□□□□ 0.08
PACS2Q86VP3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.55■□□□□ 0.08
PACS2Q86VP3 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PACS2Q86VP3 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC15.55■□□□□ 0.08
PACS2Q86VP3 CXCL1P1-201ENST00000502804 216 ntBASIC15.55■□□□□ 0.08
PACS2Q86VP3 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.55■□□□□ 0.08
PACS2Q86VP3 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC15.55■□□□□ 0.08
PACS2Q86VP3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.55■□□□□ 0.08
PACS2Q86VP3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.55■□□□□ 0.08
PACS2Q86VP3 AC096734.2-201ENST00000562054 433 ntBASIC15.55■□□□□ 0.08
PACS2Q86VP3 AC002347.1-201ENST00000569543 541 ntBASIC15.55■□□□□ 0.08
PACS2Q86VP3 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PACS2Q86VP3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PACS2Q86VP3 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC15.55■□□□□ 0.08
PACS2Q86VP3 AC007064.4-201ENST00000637740 555 ntBASIC15.55■□□□□ 0.08
PACS2Q86VP3 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PACS2Q86VP3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PACS2Q86VP3 OR2I1P-209ENST00000641730 5365 ntBASIC15.55■□□□□ 0.08
PACS2Q86VP3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PACS2Q86VP3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PACS2Q86VP3 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PACS2Q86VP3 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PACS2Q86VP3 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PACS2Q86VP3 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.55■□□□□ 0.08
PACS2Q86VP3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.55■□□□□ 0.08
PACS2Q86VP3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.55■□□□□ 0.08
PACS2Q86VP3 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
PACS2Q86VP3 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PACS2Q86VP3 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PACS2Q86VP3 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PACS2Q86VP3 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PACS2Q86VP3 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PACS2Q86VP3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.54■□□□□ 0.08
PACS2Q86VP3 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PACS2Q86VP3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PACS2Q86VP3 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PACS2Q86VP3 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PACS2Q86VP3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.54■□□□□ 0.08
PACS2Q86VP3 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PACS2Q86VP3 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PACS2Q86VP3 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PACS2Q86VP3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PACS2Q86VP3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PACS2Q86VP3 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PACS2Q86VP3 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.54■□□□□ 0.08
PACS2Q86VP3 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PACS2Q86VP3 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PACS2Q86VP3 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PACS2Q86VP3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
PACS2Q86VP3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PACS2Q86VP3 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PACS2Q86VP3 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.54■□□□□ 0.08
PACS2Q86VP3 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PACS2Q86VP3 OR7E47P-204ENST00000575924 449 ntBASIC15.54■□□□□ 0.08
PACS2Q86VP3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.54■□□□□ 0.08
PACS2Q86VP3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PACS2Q86VP3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.54■□□□□ 0.08
PACS2Q86VP3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.54■□□□□ 0.08
PACS2Q86VP3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
PACS2Q86VP3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.54■□□□□ 0.08
PACS2Q86VP3 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PACS2Q86VP3 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PACS2Q86VP3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PACS2Q86VP3 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PACS2Q86VP3 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PACS2Q86VP3 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PACS2Q86VP3 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.54■□□□□ 0.08
PACS2Q86VP3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.54■□□□□ 0.08
PACS2Q86VP3 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms