Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 AL109809.1-201ENST00000418979 1367 ntBASIC12.54□□□□□ -0.4
CSMD2Q7Z408 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 AC106827.1-201ENST00000366454 431 ntBASIC12.54□□□□□ -0.4
CSMD2Q7Z408 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 HLA-DMA-203ENST00000395305 777 ntBASIC12.54□□□□□ -0.4
CSMD2Q7Z408 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 RBM4-207ENST00000506523 654 ntTSL 3 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 MIR5001-201ENST00000580185 100 ntBASIC12.54□□□□□ -0.4
CSMD2Q7Z408 AC009884.2-201ENST00000603110 324 ntBASIC12.54□□□□□ -0.4
CSMD2Q7Z408 AC021016.3-201ENST00000608367 477 ntBASIC12.54□□□□□ -0.4
CSMD2Q7Z408 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 FAM90A21P-201ENST00000510875 1396 ntBASIC12.53□□□□□ -0.4
CSMD2Q7Z408 FAM90A15P-201ENST00000514465 1395 ntBASIC12.53□□□□□ -0.4
CSMD2Q7Z408 FAM90A6P-201ENST00000515148 1394 ntBASIC12.53□□□□□ -0.4
CSMD2Q7Z408 FAM90A16P-201ENST00000526662 1395 ntBASIC12.53□□□□□ -0.4
CSMD2Q7Z408 FAM90A9P-201ENST00000527940 1395 ntBASIC12.53□□□□□ -0.4
CSMD2Q7Z408 FAM90A5P-201ENST00000528738 1395 ntBASIC12.53□□□□□ -0.4
CSMD2Q7Z408 FAM90A14P-201ENST00000530386 1395 ntBASIC12.53□□□□□ -0.4
CSMD2Q7Z408 FAM90A13P-201ENST00000534703 1395 ntBASIC12.53□□□□□ -0.4
CSMD2Q7Z408 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 HLA-DPA2-205ENST00000433582 733 ntBASIC12.53□□□□□ -0.4
CSMD2Q7Z408 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 ABHD17AP9-201ENST00000561925 548 ntBASIC12.53□□□□□ -0.4
CSMD2Q7Z408 AC140113.1-201ENST00000603467 169 ntBASIC12.53□□□□□ -0.4
CSMD2Q7Z408 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 AL157407.1-201ENST00000435784 904 ntBASIC12.53□□□□□ -0.4
CSMD2Q7Z408 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 AC100827.2-201ENST00000563214 1194 ntBASIC12.53□□□□□ -0.4
CSMD2Q7Z408 MIR2392-201ENST00000584881 84 ntBASIC12.53□□□□□ -0.4
CSMD2Q7Z408 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 AC009145.4-201ENST00000625119 1294 ntBASIC12.53□□□□□ -0.4
CSMD2Q7Z408 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 AC084018.2-201ENST00000613093 2607 ntBASIC12.53□□□□□ -0.4
CSMD2Q7Z408 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 AL138725.1-201ENST00000407347 1314 ntBASIC12.53□□□□□ -0.4
CSMD2Q7Z408 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 NME4-203ENST00000397722 1232 ntTSL 2 BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 AC012441.2-201ENST00000444843 739 ntBASIC12.53□□□□□ -0.4
CSMD2Q7Z408 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC12.53□□□□□ -0.4
CSMD2Q7Z408 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms