Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 CRB3P1-201ENST00000449338 276 ntBASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 AC025048.3-201ENST00000590609 569 ntBASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 SRD5A3P1-201ENST00000603021 949 ntBASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 AC005702.4-201ENST00000618393 416 ntBASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 GNAQP1-201ENST00000444815 1067 ntBASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 EEF1DP4-201ENST00000446006 880 ntBASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 MEIS3P1-201ENST00000495167 958 ntBASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 AC104596.2-201ENST00000512793 793 ntBASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms