Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
VARS2Q5ST30 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VARS2Q5ST30 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.19■□□□□ 0.18
VARS2Q5ST30 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VARS2Q5ST30 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VARS2Q5ST30 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VARS2Q5ST30 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.19■□□□□ 0.18
VARS2Q5ST30 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VARS2Q5ST30 AC055811.4-201ENST00000624039 1754 ntBASIC16.19■□□□□ 0.18
VARS2Q5ST30 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.19■□□□□ 0.18
VARS2Q5ST30 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VARS2Q5ST30 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VARS2Q5ST30 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VARS2Q5ST30 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
VARS2Q5ST30 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.19■□□□□ 0.18
VARS2Q5ST30 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VARS2Q5ST30 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.19■□□□□ 0.18
VARS2Q5ST30 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VARS2Q5ST30 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
VARS2Q5ST30 FAM8A4P-201ENST00000435433 1213 ntBASIC16.19■□□□□ 0.18
VARS2Q5ST30 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.19■□□□□ 0.18
VARS2Q5ST30 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.19■□□□□ 0.18
VARS2Q5ST30 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
VARS2Q5ST30 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC16.19■□□□□ 0.18
VARS2Q5ST30 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.19■□□□□ 0.18
VARS2Q5ST30 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.19■□□□□ 0.18
VARS2Q5ST30 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.19■□□□□ 0.18
VARS2Q5ST30 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.19■□□□□ 0.18
VARS2Q5ST30 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VARS2Q5ST30 EEF1DP1-201ENST00000585891 896 ntBASIC16.19■□□□□ 0.18
VARS2Q5ST30 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.19■□□□□ 0.18
VARS2Q5ST30 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.19■□□□□ 0.18
VARS2Q5ST30 AL603764.1-201ENST00000636452 321 ntBASIC16.19■□□□□ 0.18
VARS2Q5ST30 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VARS2Q5ST30 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VARS2Q5ST30 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VARS2Q5ST30 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
VARS2Q5ST30 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VARS2Q5ST30 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VARS2Q5ST30 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
VARS2Q5ST30 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
VARS2Q5ST30 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VARS2Q5ST30 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VARS2Q5ST30 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
VARS2Q5ST30 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.19■□□□□ 0.18
VARS2Q5ST30 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.18■□□□□ 0.18
VARS2Q5ST30 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VARS2Q5ST30 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
VARS2Q5ST30 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.18■□□□□ 0.18
VARS2Q5ST30 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VARS2Q5ST30 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
VARS2Q5ST30 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VARS2Q5ST30 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.18■□□□□ 0.18
VARS2Q5ST30 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.18■□□□□ 0.18
VARS2Q5ST30 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VARS2Q5ST30 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VARS2Q5ST30 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VARS2Q5ST30 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VARS2Q5ST30 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
VARS2Q5ST30 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VARS2Q5ST30 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
VARS2Q5ST30 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VARS2Q5ST30 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
VARS2Q5ST30 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.18■□□□□ 0.18
VARS2Q5ST30 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.18■□□□□ 0.18
VARS2Q5ST30 MIR1247-201ENST00000408206 136 ntBASIC16.18■□□□□ 0.18
VARS2Q5ST30 BTBD6P1-201ENST00000412176 1267 ntBASIC16.18■□□□□ 0.18
VARS2Q5ST30 GPAA1P2-201ENST00000417923 928 ntBASIC16.18■□□□□ 0.18
VARS2Q5ST30 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.18■□□□□ 0.18
VARS2Q5ST30 AC007969.1-201ENST00000433675 447 ntBASIC16.18■□□□□ 0.18
VARS2Q5ST30 MTX1P1-201ENST00000440904 838 ntBASIC16.18■□□□□ 0.18
VARS2Q5ST30 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC16.18■□□□□ 0.18
VARS2Q5ST30 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VARS2Q5ST30 AC055748.1-201ENST00000489836 959 ntBASIC16.18■□□□□ 0.18
VARS2Q5ST30 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.18■□□□□ 0.18
VARS2Q5ST30 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
VARS2Q5ST30 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
VARS2Q5ST30 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.18■□□□□ 0.18
VARS2Q5ST30 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.18■□□□□ 0.18
VARS2Q5ST30 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
VARS2Q5ST30 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.18■□□□□ 0.18
VARS2Q5ST30 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.18■□□□□ 0.18
VARS2Q5ST30 AL118558.3-201ENST00000607414 1079 ntBASIC16.18■□□□□ 0.18
VARS2Q5ST30 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VARS2Q5ST30 AL157414.3-201ENST00000624276 1954 ntBASIC16.18■□□□□ 0.18
VARS2Q5ST30 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VARS2Q5ST30 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
VARS2Q5ST30 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VARS2Q5ST30 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.18■□□□□ 0.18
VARS2Q5ST30 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VARS2Q5ST30 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.18■□□□□ 0.18
VARS2Q5ST30 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VARS2Q5ST30 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.18■□□□□ 0.18
VARS2Q5ST30 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VARS2Q5ST30 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.17■□□□□ 0.18
VARS2Q5ST30 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
VARS2Q5ST30 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.17■□□□□ 0.18
VARS2Q5ST30 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.17■□□□□ 0.18
VARS2Q5ST30 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VARS2Q5ST30 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms