Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
LRRK2Q5S007 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRK2Q5S007 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRK2Q5S007 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRK2Q5S007 LINC02199-201ENST00000506655 2702 ntBASIC13.01□□□□□ -0.33
LRRK2Q5S007 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRK2Q5S007 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRK2Q5S007 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC13.01□□□□□ -0.33
LRRK2Q5S007 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRK2Q5S007 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRK2Q5S007 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
LRRK2Q5S007 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRK2Q5S007 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
LRRK2Q5S007 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
LRRK2Q5S007 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LRRK2Q5S007 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC13.01□□□□□ -0.33
LRRK2Q5S007 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LRRK2Q5S007 AC108724.1-201ENST00000481669 352 ntBASIC13.01□□□□□ -0.33
LRRK2Q5S007 AC113347.2-201ENST00000512350 279 ntBASIC13.01□□□□□ -0.33
LRRK2Q5S007 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC13.01□□□□□ -0.33
LRRK2Q5S007 EMC4-208ENST00000559078 599 ntTSL 3 BASIC13.01□□□□□ -0.33
LRRK2Q5S007 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LRRK2Q5S007 MIR3188-201ENST00000583494 85 ntBASIC13.01□□□□□ -0.33
LRRK2Q5S007 CTBP2P8-201ENST00000422584 1330 ntBASIC13.01□□□□□ -0.33
LRRK2Q5S007 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
LRRK2Q5S007 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LRRK2Q5S007 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRK2Q5S007 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRK2Q5S007 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRK2Q5S007 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRK2Q5S007 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.01□□□□□ -0.33
LRRK2Q5S007 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC13.01□□□□□ -0.33
LRRK2Q5S007 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
LRRK2Q5S007 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
LRRK2Q5S007 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LRRK2Q5S007 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LRRK2Q5S007 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LRRK2Q5S007 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13□□□□□ -0.33
LRRK2Q5S007 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
LRRK2Q5S007 MARK2P16-201ENST00000605714 1723 ntBASIC13□□□□□ -0.33
LRRK2Q5S007 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LRRK2Q5S007 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13□□□□□ -0.33
LRRK2Q5S007 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LRRK2Q5S007 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13□□□□□ -0.33
LRRK2Q5S007 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC13□□□□□ -0.33
LRRK2Q5S007 RN7SL494P-201ENST00000461517 304 ntBASIC13□□□□□ -0.33
LRRK2Q5S007 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC13□□□□□ -0.33
LRRK2Q5S007 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13□□□□□ -0.33
LRRK2Q5S007 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC13□□□□□ -0.33
LRRK2Q5S007 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
LRRK2Q5S007 CYP4F36P-201ENST00000589193 186 ntBASIC13□□□□□ -0.33
LRRK2Q5S007 AC140113.1-201ENST00000603467 169 ntBASIC13□□□□□ -0.33
LRRK2Q5S007 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
LRRK2Q5S007 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13□□□□□ -0.33
LRRK2Q5S007 AC090510.3-201ENST00000615831 821 ntBASIC13□□□□□ -0.33
LRRK2Q5S007 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC13□□□□□ -0.33
LRRK2Q5S007 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
LRRK2Q5S007 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC13□□□□□ -0.33
LRRK2Q5S007 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
LRRK2Q5S007 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
LRRK2Q5S007 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC13□□□□□ -0.33
LRRK2Q5S007 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
LRRK2Q5S007 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13□□□□□ -0.33
LRRK2Q5S007 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LRRK2Q5S007 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LRRK2Q5S007 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13□□□□□ -0.33
LRRK2Q5S007 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LRRK2Q5S007 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LRRK2Q5S007 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
LRRK2Q5S007 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LRRK2Q5S007 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LRRK2Q5S007 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13□□□□□ -0.33
LRRK2Q5S007 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13□□□□□ -0.33
LRRK2Q5S007 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LRRK2Q5S007 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LRRK2Q5S007 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC13□□□□□ -0.33
LRRK2Q5S007 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
LRRK2Q5S007 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC13□□□□□ -0.33
LRRK2Q5S007 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC13□□□□□ -0.33
LRRK2Q5S007 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
LRRK2Q5S007 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC13□□□□□ -0.33
LRRK2Q5S007 AC063952.3-201ENST00000467756 308 ntBASIC13□□□□□ -0.33
LRRK2Q5S007 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC13□□□□□ -0.33
LRRK2Q5S007 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
LRRK2Q5S007 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13□□□□□ -0.33
LRRK2Q5S007 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13□□□□□ -0.33
LRRK2Q5S007 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LRRK2Q5S007 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13□□□□□ -0.33
LRRK2Q5S007 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC13□□□□□ -0.33
LRRK2Q5S007 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13□□□□□ -0.33
LRRK2Q5S007 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13□□□□□ -0.33
LRRK2Q5S007 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LRRK2Q5S007 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LRRK2Q5S007 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13□□□□□ -0.33
LRRK2Q5S007 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LRRK2Q5S007 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LRRK2Q5S007 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LRRK2Q5S007 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LRRK2Q5S007 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.99□□□□□ -0.33
LRRK2Q5S007 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms