Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC93Q567U6 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC93Q567U6 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC93Q567U6 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CCDC93Q567U6 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC93Q567U6 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC93Q567U6 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC93Q567U6 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC93Q567U6 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC93Q567U6 CEP164P1-201ENST00000455142 418 ntBASIC18.65■□□□□ 0.58
CCDC93Q567U6 AC019193.1-201ENST00000506678 823 ntBASIC18.65■□□□□ 0.58
CCDC93Q567U6 AC090164.2-201ENST00000611487 516 ntBASIC18.65■□□□□ 0.58
CCDC93Q567U6 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC93Q567U6 AL645728.2-202ENST00000641679 227 ntBASIC18.65■□□□□ 0.58
CCDC93Q567U6 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC93Q567U6 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC93Q567U6 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC93Q567U6 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC93Q567U6 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC93Q567U6 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC93Q567U6 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC93Q567U6 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC93Q567U6 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CCDC93Q567U6 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC93Q567U6 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC93Q567U6 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC93Q567U6 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC93Q567U6 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC93Q567U6 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.64■□□□□ 0.58
CCDC93Q567U6 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC93Q567U6 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC93Q567U6 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC93Q567U6 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC93Q567U6 AL355334.1-201ENST00000417713 215 ntBASIC18.64■□□□□ 0.57
CCDC93Q567U6 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC93Q567U6 AC116345.2-201ENST00000512837 523 ntBASIC18.64■□□□□ 0.57
CCDC93Q567U6 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC93Q567U6 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC93Q567U6 AC012044.1-201ENST00000603431 297 ntBASIC18.64■□□□□ 0.57
CCDC93Q567U6 AC073352.2-201ENST00000609385 439 ntBASIC18.64■□□□□ 0.57
CCDC93Q567U6 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC93Q567U6 PCBP2-OT1-201ENST00000634357 590 ntBASIC18.64■□□□□ 0.57
CCDC93Q567U6 AC006453.1-201ENST00000636037 1257 ntBASIC18.64■□□□□ 0.57
CCDC93Q567U6 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC93Q567U6 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CCDC93Q567U6 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC93Q567U6 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC93Q567U6 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC93Q567U6 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC93Q567U6 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC93Q567U6 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC93Q567U6 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC93Q567U6 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC93Q567U6 AC104640.1-201ENST00000562617 2109 ntBASIC18.64■□□□□ 0.57
CCDC93Q567U6 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC93Q567U6 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC93Q567U6 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC93Q567U6 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CCDC93Q567U6 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC93Q567U6 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC93Q567U6 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC93Q567U6 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC93Q567U6 AC092364.2-201ENST00000596710 2692 ntBASIC18.63■□□□□ 0.57
CCDC93Q567U6 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC93Q567U6 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC93Q567U6 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC93Q567U6 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC93Q567U6 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC93Q567U6 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC93Q567U6 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC93Q567U6 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CCDC93Q567U6 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CCDC93Q567U6 PDIA3P2-201ENST00000428073 158 ntBASIC18.63■□□□□ 0.57
CCDC93Q567U6 PUDPP3-201ENST00000445368 636 ntBASIC18.63■□□□□ 0.57
CCDC93Q567U6 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC93Q567U6 AC023824.1-201ENST00000562945 2975 ntBASIC18.63■□□□□ 0.57
CCDC93Q567U6 AC100827.2-201ENST00000563214 1194 ntBASIC18.63■□□□□ 0.57
CCDC93Q567U6 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC93Q567U6 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC93Q567U6 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC93Q567U6 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC93Q567U6 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC93Q567U6 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC93Q567U6 COX6A1P2-201ENST00000620597 330 ntBASIC18.63■□□□□ 0.57
CCDC93Q567U6 AC011491.1-203ENST00000637688 543 ntBASIC18.63■□□□□ 0.57
CCDC93Q567U6 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC93Q567U6 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC93Q567U6 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
CCDC93Q567U6 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC93Q567U6 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC93Q567U6 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC93Q567U6 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC93Q567U6 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC93Q567U6 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC93Q567U6 AC084364.1-201ENST00000551967 1556 ntBASIC18.63■□□□□ 0.57
CCDC93Q567U6 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC93Q567U6 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC93Q567U6 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC93Q567U6 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC93Q567U6 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms