Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 MIR4683-201ENST00000579659 81 ntBASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO4Q2I0M5 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 AL627422.1-201ENST00000434104 580 ntBASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 BRI3P1-201ENST00000440440 378 ntBASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 AC004837.1-201ENST00000446267 564 ntBASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 AC084752.1-201ENST00000509766 622 ntBASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 AC138466.3-201ENST00000619983 221 ntBASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 MIR6816-201ENST00000620368 66 ntBASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 AC090502.4-201ENST00000551714 1386 ntBASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RSPO4Q2I0M5 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.67□□□□□ -0.06
RSPO4Q2I0M5 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RSPO4Q2I0M5 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.67□□□□□ -0.06
RSPO4Q2I0M5 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
RSPO4Q2I0M5 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.67□□□□□ -0.06
RSPO4Q2I0M5 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RSPO4Q2I0M5 HNRNPA1P58-201ENST00000403629 610 ntBASIC14.67□□□□□ -0.06
RSPO4Q2I0M5 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.67□□□□□ -0.06
RSPO4Q2I0M5 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RSPO4Q2I0M5 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC14.67□□□□□ -0.06
RSPO4Q2I0M5 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC14.67□□□□□ -0.06
RSPO4Q2I0M5 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC14.67□□□□□ -0.06
RSPO4Q2I0M5 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
RSPO4Q2I0M5 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
RSPO4Q2I0M5 MIR4472-1-201ENST00000584349 80 ntBASIC14.67□□□□□ -0.06
RSPO4Q2I0M5 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.67□□□□□ -0.06
RSPO4Q2I0M5 MIR6769A-201ENST00000617340 73 ntBASIC14.67□□□□□ -0.06
RSPO4Q2I0M5 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC14.67□□□□□ -0.06
RSPO4Q2I0M5 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.67□□□□□ -0.06
RSPO4Q2I0M5 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RSPO4Q2I0M5 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RSPO4Q2I0M5 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.67□□□□□ -0.06
RSPO4Q2I0M5 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RSPO4Q2I0M5 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RSPO4Q2I0M5 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RSPO4Q2I0M5 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RSPO4Q2I0M5 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RSPO4Q2I0M5 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.67□□□□□ -0.06
RSPO4Q2I0M5 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.67□□□□□ -0.06
RSPO4Q2I0M5 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RSPO4Q2I0M5 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RSPO4Q2I0M5 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RSPO4Q2I0M5 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO4Q2I0M5 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms