Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
CD47Q08722 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.3□□□□□ -0.12
CD47Q08722 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.3□□□□□ -0.12
CD47Q08722 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CD47Q08722 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
CD47Q08722 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD47Q08722 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD47Q08722 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.3□□□□□ -0.12
CD47Q08722 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.3□□□□□ -0.12
CD47Q08722 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.3□□□□□ -0.12
CD47Q08722 AC069335.1-201ENST00000489972 472 ntBASIC14.3□□□□□ -0.12
CD47Q08722 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.3□□□□□ -0.12
CD47Q08722 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.3□□□□□ -0.12
CD47Q08722 SLC25A39P2-201ENST00000537614 270 ntBASIC14.3□□□□□ -0.12
CD47Q08722 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.3□□□□□ -0.12
CD47Q08722 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.3□□□□□ -0.12
CD47Q08722 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.3□□□□□ -0.12
CD47Q08722 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.3□□□□□ -0.12
CD47Q08722 AL450472.2-201ENST00000603663 1156 ntBASIC14.3□□□□□ -0.12
CD47Q08722 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CD47Q08722 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.3□□□□□ -0.12
CD47Q08722 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.3□□□□□ -0.12
CD47Q08722 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.3□□□□□ -0.12
CD47Q08722 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD47Q08722 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD47Q08722 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD47Q08722 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CD47Q08722 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD47Q08722 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD47Q08722 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.3□□□□□ -0.12
CD47Q08722 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD47Q08722 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CD47Q08722 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD47Q08722 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
CD47Q08722 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD47Q08722 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD47Q08722 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.3□□□□□ -0.12
CD47Q08722 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD47Q08722 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
CD47Q08722 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD47Q08722 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD47Q08722 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD47Q08722 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD47Q08722 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD47Q08722 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CD47Q08722 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD47Q08722 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.3□□□□□ -0.12
CD47Q08722 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD47Q08722 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD47Q08722 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD47Q08722 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD47Q08722 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD47Q08722 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CD47Q08722 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CD47Q08722 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CD47Q08722 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD47Q08722 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.29□□□□□ -0.12
CD47Q08722 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD47Q08722 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.29□□□□□ -0.12
CD47Q08722 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CD47Q08722 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.29□□□□□ -0.12
CD47Q08722 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CD47Q08722 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.29□□□□□ -0.12
CD47Q08722 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD47Q08722 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD47Q08722 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD47Q08722 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD47Q08722 MIR346-201ENST00000362234 95 ntBASIC14.29□□□□□ -0.12
CD47Q08722 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
CD47Q08722 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.29□□□□□ -0.12
CD47Q08722 BX842568.4-201ENST00000421222 227 ntBASIC14.29□□□□□ -0.12
CD47Q08722 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.29□□□□□ -0.12
CD47Q08722 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.29□□□□□ -0.12
CD47Q08722 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CD47Q08722 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.29□□□□□ -0.12
CD47Q08722 LINC01225-203ENST00000563550 1244 ntBASIC14.29□□□□□ -0.12
CD47Q08722 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.29□□□□□ -0.12
CD47Q08722 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.29□□□□□ -0.12
CD47Q08722 MIR4469-201ENST00000583919 79 ntBASIC14.29□□□□□ -0.12
CD47Q08722 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD47Q08722 AC010327.4-202ENST00000591484 748 ntBASIC14.29□□□□□ -0.12
CD47Q08722 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.29□□□□□ -0.12
CD47Q08722 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CD47Q08722 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CD47Q08722 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD47Q08722 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD47Q08722 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD47Q08722 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD47Q08722 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.29□□□□□ -0.12
CD47Q08722 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CD47Q08722 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.29□□□□□ -0.12
CD47Q08722 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.29□□□□□ -0.12
CD47Q08722 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.29□□□□□ -0.12
CD47Q08722 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD47Q08722 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD47Q08722 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD47Q08722 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD47Q08722 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD47Q08722 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD47Q08722 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms