Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 AC018665.1-201ENST00000622927 1362 ntBASIC12.97□□□□□ -0.33
SSBP1Q04837 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.97□□□□□ -0.33
SSBP1Q04837 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP1Q04837 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP1Q04837 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SSBP1Q04837 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.97□□□□□ -0.33
SSBP1Q04837 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SSBP1Q04837 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP1Q04837 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP1Q04837 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SSBP1Q04837 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP1Q04837 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
SSBP1Q04837 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.97□□□□□ -0.33
SSBP1Q04837 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.97□□□□□ -0.33
SSBP1Q04837 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP1Q04837 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
SSBP1Q04837 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
SSBP1Q04837 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
SSBP1Q04837 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.97□□□□□ -0.33
SSBP1Q04837 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP1Q04837 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
SSBP1Q04837 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.97□□□□□ -0.33
SSBP1Q04837 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SSBP1Q04837 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP1Q04837 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC12.97□□□□□ -0.33
SSBP1Q04837 KRT19P2-202ENST00000557173 1012 ntBASIC12.97□□□□□ -0.33
SSBP1Q04837 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC12.97□□□□□ -0.33
SSBP1Q04837 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC12.97□□□□□ -0.33
SSBP1Q04837 AC004877.2-201ENST00000623941 599 ntBASIC12.97□□□□□ -0.33
SSBP1Q04837 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SSBP1Q04837 FAM215A-202ENST00000632077 792 ntBASIC12.97□□□□□ -0.33
SSBP1Q04837 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP1Q04837 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.97□□□□□ -0.33
SSBP1Q04837 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.97□□□□□ -0.33
SSBP1Q04837 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP1Q04837 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.97□□□□□ -0.33
SSBP1Q04837 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP1Q04837 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.97□□□□□ -0.33
SSBP1Q04837 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP1Q04837 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP1Q04837 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
SSBP1Q04837 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.97□□□□□ -0.33
SSBP1Q04837 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.97□□□□□ -0.33
SSBP1Q04837 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.96□□□□□ -0.33
SSBP1Q04837 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP1Q04837 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
SSBP1Q04837 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
SSBP1Q04837 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP1Q04837 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP1Q04837 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP1Q04837 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.96□□□□□ -0.33
SSBP1Q04837 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP1Q04837 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP1Q04837 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP1Q04837 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP1Q04837 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP1Q04837 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP1Q04837 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
SSBP1Q04837 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP1Q04837 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP1Q04837 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP1Q04837 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC12.96□□□□□ -0.33
SSBP1Q04837 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
SSBP1Q04837 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP1Q04837 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP1Q04837 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.96□□□□□ -0.33
SSBP1Q04837 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP1Q04837 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP1Q04837 AL591122.2-201ENST00000624125 1853 ntBASIC12.96□□□□□ -0.33
SSBP1Q04837 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
SSBP1Q04837 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.96□□□□□ -0.33
SSBP1Q04837 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP1Q04837 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP1Q04837 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP1Q04837 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.96□□□□□ -0.33
SSBP1Q04837 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP1Q04837 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP1Q04837 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP1Q04837 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
SSBP1Q04837 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
SSBP1Q04837 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.96□□□□□ -0.33
SSBP1Q04837 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC12.96□□□□□ -0.33
SSBP1Q04837 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC12.96□□□□□ -0.33
SSBP1Q04837 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP1Q04837 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP1Q04837 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC12.96□□□□□ -0.33
SSBP1Q04837 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC12.96□□□□□ -0.33
SSBP1Q04837 RMI2-205ENST00000576027 818 ntTSL 2 BASIC12.96□□□□□ -0.33
SSBP1Q04837 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC12.96□□□□□ -0.33
SSBP1Q04837 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP1Q04837 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.96□□□□□ -0.33
SSBP1Q04837 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP1Q04837 AC099522.2-201ENST00000607001 744 ntBASIC12.96□□□□□ -0.33
SSBP1Q04837 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.96□□□□□ -0.33
SSBP1Q04837 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC12.96□□□□□ -0.33
SSBP1Q04837 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.96□□□□□ -0.33
SSBP1Q04837 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP1Q04837 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC12.96□□□□□ -0.33
SSBP1Q04837 AGGF1P1-201ENST00000509500 2073 ntBASIC12.96□□□□□ -0.33
SSBP1Q04837 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms