Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC18.56■□□□□ 0.56
SCN7AQ01118 AC027601.3-201ENST00000622907 509 ntBASIC18.56■□□□□ 0.56
SCN7AQ01118 C18orf15-201ENST00000623680 2534 ntBASIC18.56■□□□□ 0.56
SCN7AQ01118 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.56■□□□□ 0.56
SCN7AQ01118 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SCN7AQ01118 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN7AQ01118 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SCN7AQ01118 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.56■□□□□ 0.56
SCN7AQ01118 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC18.56■□□□□ 0.56
SCN7AQ01118 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN7AQ01118 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SCN7AQ01118 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.55■□□□□ 0.56
SCN7AQ01118 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.55■□□□□ 0.56
SCN7AQ01118 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC18.55■□□□□ 0.56
SCN7AQ01118 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN7AQ01118 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCN7AQ01118 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN7AQ01118 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SCN7AQ01118 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.55■□□□□ 0.56
SCN7AQ01118 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC18.55■□□□□ 0.56
SCN7AQ01118 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN7AQ01118 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SCN7AQ01118 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCN7AQ01118 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCN7AQ01118 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN7AQ01118 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN7AQ01118 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN7AQ01118 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN7AQ01118 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCN7AQ01118 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCN7AQ01118 TSPY25P-201ENST00000429463 745 ntBASIC18.55■□□□□ 0.56
SCN7AQ01118 RPL13AP19-201ENST00000434320 584 ntBASIC18.55■□□□□ 0.56
SCN7AQ01118 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCN7AQ01118 MRPL22P1-201ENST00000505398 616 ntBASIC18.55■□□□□ 0.56
SCN7AQ01118 AC008723.1-201ENST00000506922 207 ntBASIC18.55■□□□□ 0.56
SCN7AQ01118 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCN7AQ01118 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC18.55■□□□□ 0.56
SCN7AQ01118 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN7AQ01118 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN7AQ01118 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC18.55■□□□□ 0.56
SCN7AQ01118 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
SCN7AQ01118 AC084781.1-201ENST00000613737 656 ntBASIC18.55■□□□□ 0.56
SCN7AQ01118 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC18.55■□□□□ 0.56
SCN7AQ01118 AC025262.2-201ENST00000623975 1056 ntBASIC18.55■□□□□ 0.56
SCN7AQ01118 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC18.55■□□□□ 0.56
SCN7AQ01118 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN7AQ01118 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC18.55■□□□□ 0.56
SCN7AQ01118 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
SCN7AQ01118 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC18.55■□□□□ 0.56
SCN7AQ01118 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCN7AQ01118 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN7AQ01118 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN7AQ01118 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.54■□□□□ 0.56
SCN7AQ01118 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.54■□□□□ 0.56
SCN7AQ01118 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCN7AQ01118 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCN7AQ01118 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCN7AQ01118 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCN7AQ01118 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCN7AQ01118 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC18.54■□□□□ 0.56
SCN7AQ01118 KRT18P66-201ENST00000452970 1269 ntBASIC18.54■□□□□ 0.56
SCN7AQ01118 AC079112.1-201ENST00000454972 939 ntBASIC18.54■□□□□ 0.56
SCN7AQ01118 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC18.54■□□□□ 0.56
SCN7AQ01118 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCN7AQ01118 MIR4649-201ENST00000582839 64 ntBASIC18.54■□□□□ 0.56
SCN7AQ01118 MIR6842-201ENST00000612539 65 ntBASIC18.54■□□□□ 0.56
SCN7AQ01118 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SCN7AQ01118 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCN7AQ01118 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.54■□□□□ 0.56
SCN7AQ01118 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCN7AQ01118 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCN7AQ01118 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCN7AQ01118 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCN7AQ01118 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCN7AQ01118 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCN7AQ01118 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC18.54■□□□□ 0.56
SCN7AQ01118 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCN7AQ01118 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC18.54■□□□□ 0.56
SCN7AQ01118 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC18.54■□□□□ 0.56
SCN7AQ01118 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC18.54■□□□□ 0.56
SCN7AQ01118 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC18.54■□□□□ 0.56
SCN7AQ01118 PGAM1P5-201ENST00000548011 764 ntBASIC18.54■□□□□ 0.56
SCN7AQ01118 DNM1P30-201ENST00000563586 452 ntBASIC18.54■□□□□ 0.56
SCN7AQ01118 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SCN7AQ01118 HLA-C-210ENST00000640219 976 ntBASIC18.54■□□□□ 0.56
SCN7AQ01118 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCN7AQ01118 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN7AQ01118 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCN7AQ01118 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
SCN7AQ01118 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC18.53■□□□□ 0.56
SCN7AQ01118 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.53■□□□□ 0.56
SCN7AQ01118 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SCN7AQ01118 KRT18P9-201ENST00000604826 1300 ntBASIC18.53■□□□□ 0.56
SCN7AQ01118 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCN7AQ01118 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
SCN7AQ01118 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC18.53■□□□□ 0.56
SCN7AQ01118 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCN7AQ01118 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN7AQ01118 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCN7AQ01118 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms