Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC9.13□□□□□ -0.95
HSPG2P98160 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC9.13□□□□□ -0.95
HSPG2P98160 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC9.13□□□□□ -0.95
HSPG2P98160 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
HSPG2P98160 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
HSPG2P98160 MT2A-202ENST00000561491 581 ntTSL 2 BASIC9.13□□□□□ -0.95
HSPG2P98160 RN7SL357P-201ENST00000581065 298 ntBASIC9.13□□□□□ -0.95
HSPG2P98160 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC9.13□□□□□ -0.95
HSPG2P98160 AC245369.7-201ENST00000631386 350 ntBASIC9.13□□□□□ -0.95
HSPG2P98160 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
HSPG2P98160 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
HSPG2P98160 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC9.13□□□□□ -0.95
HSPG2P98160 CICP11-201ENST00000434745 2827 ntBASIC9.13□□□□□ -0.95
HSPG2P98160 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC9.13□□□□□ -0.95
HSPG2P98160 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
HSPG2P98160 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC9.13□□□□□ -0.95
HSPG2P98160 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
HSPG2P98160 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
HSPG2P98160 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
HSPG2P98160 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
HSPG2P98160 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
HSPG2P98160 RN7SL288P-201ENST00000490496 291 ntBASIC9.13□□□□□ -0.95
HSPG2P98160 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC9.13□□□□□ -0.95
HSPG2P98160 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC9.13□□□□□ -0.95
HSPG2P98160 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
HSPG2P98160 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
HSPG2P98160 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC9.13□□□□□ -0.95
HSPG2P98160 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC9.13□□□□□ -0.95
HSPG2P98160 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC9.13□□□□□ -0.95
HSPG2P98160 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC9.13□□□□□ -0.95
HSPG2P98160 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC9.13□□□□□ -0.95
HSPG2P98160 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
HSPG2P98160 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
HSPG2P98160 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC9.13□□□□□ -0.95
HSPG2P98160 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
HSPG2P98160 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
HSPG2P98160 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
HSPG2P98160 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
HSPG2P98160 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
HSPG2P98160 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
HSPG2P98160 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC9.13□□□□□ -0.95
HSPG2P98160 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
HSPG2P98160 AC226150.1-201ENST00000544259 466 ntBASIC9.13□□□□□ -0.95
HSPG2P98160 MIR4746-201ENST00000579802 71 ntBASIC9.13□□□□□ -0.95
HSPG2P98160 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC9.13□□□□□ -0.95
HSPG2P98160 SP100-205ENST00000409824 1802 ntTSL 5 BASIC9.13□□□□□ -0.95
HSPG2P98160 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
HSPG2P98160 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
HSPG2P98160 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
HSPG2P98160 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
HSPG2P98160 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
HSPG2P98160 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
HSPG2P98160 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
HSPG2P98160 MIR645-201ENST00000385283 94 ntBASIC9.12□□□□□ -0.95
HSPG2P98160 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC9.12□□□□□ -0.95
HSPG2P98160 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
HSPG2P98160 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
HSPG2P98160 MIR6893-201ENST00000613458 69 ntBASIC9.12□□□□□ -0.95
HSPG2P98160 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC9.12□□□□□ -0.95
HSPG2P98160 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
HSPG2P98160 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC9.12□□□□□ -0.95
HSPG2P98160 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
HSPG2P98160 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC9.12□□□□□ -0.95
HSPG2P98160 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
HSPG2P98160 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
HSPG2P98160 FUCA1P1-201ENST00000374476 1351 ntBASIC9.12□□□□□ -0.95
HSPG2P98160 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC9.12□□□□□ -0.95
HSPG2P98160 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
HSPG2P98160 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
HSPG2P98160 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC9.12□□□□□ -0.95
HSPG2P98160 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
HSPG2P98160 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
HSPG2P98160 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
HSPG2P98160 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC9.12□□□□□ -0.95
HSPG2P98160 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC9.12□□□□□ -0.95
HSPG2P98160 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
HSPG2P98160 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC9.12□□□□□ -0.95
HSPG2P98160 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
HSPG2P98160 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC9.12□□□□□ -0.95
HSPG2P98160 AP006248.1-201ENST00000610471 67 ntBASIC9.12□□□□□ -0.95
HSPG2P98160 PHF23-213ENST00000613632 850 ntTSL 5 BASIC9.12□□□□□ -0.95
HSPG2P98160 AL512324.3-201ENST00000619383 882 ntBASIC9.12□□□□□ -0.95
HSPG2P98160 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
HSPG2P98160 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
HSPG2P98160 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
HSPG2P98160 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC9.12□□□□□ -0.95
HSPG2P98160 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
HSPG2P98160 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
HSPG2P98160 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC9.12□□□□□ -0.95
HSPG2P98160 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
HSPG2P98160 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
HSPG2P98160 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC9.12□□□□□ -0.95
HSPG2P98160 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC9.12□□□□□ -0.95
HSPG2P98160 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC9.12□□□□□ -0.95
HSPG2P98160 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
HSPG2P98160 CICP12-201ENST00000455801 843 ntBASIC9.12□□□□□ -0.95
HSPG2P98160 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC9.12□□□□□ -0.95
HSPG2P98160 HERC2P11-201ENST00000562845 725 ntBASIC9.12□□□□□ -0.95
HSPG2P98160 AC100756.2-201ENST00000569537 736 ntBASIC9.12□□□□□ -0.95
HSPG2P98160 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms