Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GABREP78334 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GABREP78334 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GABREP78334 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
GABREP78334 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GABREP78334 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GABREP78334 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.52□□□□□ -0.09
GABREP78334 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
GABREP78334 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.52□□□□□ -0.09
GABREP78334 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.52□□□□□ -0.09
GABREP78334 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
GABREP78334 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GABREP78334 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.52□□□□□ -0.09
GABREP78334 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GABREP78334 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GABREP78334 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.52□□□□□ -0.09
GABREP78334 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
GABREP78334 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GABREP78334 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GABREP78334 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GABREP78334 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GABREP78334 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GABREP78334 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GABREP78334 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GABREP78334 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.51□□□□□ -0.09
GABREP78334 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GABREP78334 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GABREP78334 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.51□□□□□ -0.09
GABREP78334 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.51□□□□□ -0.09
GABREP78334 AC068418.2-201ENST00000577309 3703 ntBASIC14.51□□□□□ -0.09
GABREP78334 KRT8P14-201ENST00000414254 1442 ntBASIC14.51□□□□□ -0.09
GABREP78334 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
GABREP78334 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
GABREP78334 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.51□□□□□ -0.09
GABREP78334 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.51□□□□□ -0.09
GABREP78334 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GABREP78334 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
GABREP78334 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.51□□□□□ -0.09
GABREP78334 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GABREP78334 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.51□□□□□ -0.09
GABREP78334 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GABREP78334 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GABREP78334 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GABREP78334 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.51□□□□□ -0.09
GABREP78334 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GABREP78334 AL645937.2-201ENST00000396808 931 ntBASIC14.51□□□□□ -0.09
GABREP78334 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GABREP78334 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
GABREP78334 AC011742.3-201ENST00000439053 820 ntBASIC14.51□□□□□ -0.09
GABREP78334 HIST2H2BB-201ENST00000449108 381 ntBASIC14.51□□□□□ -0.09
GABREP78334 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.51□□□□□ -0.09
GABREP78334 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC14.51□□□□□ -0.09
GABREP78334 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.51□□□□□ -0.09
GABREP78334 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GABREP78334 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.51□□□□□ -0.09
GABREP78334 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.51□□□□□ -0.09
GABREP78334 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.51□□□□□ -0.09
GABREP78334 MIR3907-201ENST00000579424 151 ntBASIC14.51□□□□□ -0.09
GABREP78334 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.51□□□□□ -0.09
GABREP78334 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC14.51□□□□□ -0.09
GABREP78334 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GABREP78334 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.51□□□□□ -0.09
GABREP78334 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.51□□□□□ -0.09
GABREP78334 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
GABREP78334 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.51□□□□□ -0.09
GABREP78334 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.51□□□□□ -0.09
GABREP78334 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
GABREP78334 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
GABREP78334 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.51□□□□□ -0.09
GABREP78334 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
GABREP78334 TCAF2P1-201ENST00000291129 2421 ntBASIC14.51□□□□□ -0.09
GABREP78334 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
GABREP78334 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GABREP78334 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.51□□□□□ -0.09
GABREP78334 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GABREP78334 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
GABREP78334 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GABREP78334 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GABREP78334 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
GABREP78334 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.5□□□□□ -0.09
GABREP78334 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.5□□□□□ -0.09
GABREP78334 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GABREP78334 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GABREP78334 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
GABREP78334 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
GABREP78334 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.5□□□□□ -0.09
GABREP78334 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.5□□□□□ -0.09
GABREP78334 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
GABREP78334 TUBBP5-203ENST00000508529 1334 ntBASIC14.5□□□□□ -0.09
GABREP78334 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.5□□□□□ -0.09
GABREP78334 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GABREP78334 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GABREP78334 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GABREP78334 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
GABREP78334 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GABREP78334 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.5□□□□□ -0.09
GABREP78334 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
GABREP78334 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
GABREP78334 AC104457.1-201ENST00000401024 814 ntBASIC14.5□□□□□ -0.09
GABREP78334 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms