Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RPL39P62891 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC10.89□□□□□ -0.67
RPL39P62891 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RPL39P62891 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RPL39P62891 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
RPL39P62891 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RPL39P62891 AC152010.1-201ENST00000415779 2006 ntBASIC10.89□□□□□ -0.67
RPL39P62891 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
RPL39P62891 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
RPL39P62891 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC10.89□□□□□ -0.67
RPL39P62891 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RPL39P62891 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC10.88□□□□□ -0.67
RPL39P62891 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC10.88□□□□□ -0.67
RPL39P62891 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC10.88□□□□□ -0.67
RPL39P62891 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC10.88□□□□□ -0.67
RPL39P62891 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RPL39P62891 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
RPL39P62891 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RPL39P62891 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
RPL39P62891 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
RPL39P62891 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RPL39P62891 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
RPL39P62891 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RPL39P62891 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RPL39P62891 AC018442.1-201ENST00000421439 2061 ntBASIC10.88□□□□□ -0.67
RPL39P62891 CICP17-201ENST00000418553 2377 ntBASIC10.88□□□□□ -0.67
RPL39P62891 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC10.88□□□□□ -0.67
RPL39P62891 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
RPL39P62891 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
RPL39P62891 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC10.88□□□□□ -0.67
RPL39P62891 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
RPL39P62891 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RPL39P62891 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
RPL39P62891 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RPL39P62891 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
RPL39P62891 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
RPL39P62891 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC10.88□□□□□ -0.67
RPL39P62891 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC10.88□□□□□ -0.67
RPL39P62891 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC10.88□□□□□ -0.67
RPL39P62891 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
RPL39P62891 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RPL39P62891 PP14571-201ENST00000404327 934 ntTSL 2 BASIC10.88□□□□□ -0.67
RPL39P62891 GHSR-202ENST00000427970 912 ntBASIC10.88□□□□□ -0.67
RPL39P62891 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RPL39P62891 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
RPL39P62891 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC10.88□□□□□ -0.67
RPL39P62891 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC10.88□□□□□ -0.67
RPL39P62891 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC10.88□□□□□ -0.67
RPL39P62891 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC10.88□□□□□ -0.67
RPL39P62891 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC10.88□□□□□ -0.67
RPL39P62891 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
RPL39P62891 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC10.88□□□□□ -0.67
RPL39P62891 UNC93B7-201ENST00000509439 705 ntBASIC10.88□□□□□ -0.67
RPL39P62891 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
RPL39P62891 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC10.88□□□□□ -0.67
RPL39P62891 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
RPL39P62891 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RPL39P62891 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC10.88□□□□□ -0.67
RPL39P62891 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC10.88□□□□□ -0.67
RPL39P62891 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
RPL39P62891 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC10.88□□□□□ -0.67
RPL39P62891 KRT19P2-202ENST00000557173 1012 ntBASIC10.88□□□□□ -0.67
RPL39P62891 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC10.88□□□□□ -0.67
RPL39P62891 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC10.88□□□□□ -0.67
RPL39P62891 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
RPL39P62891 AC018845.2-201ENST00000568326 409 ntBASIC10.88□□□□□ -0.67
RPL39P62891 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
RPL39P62891 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
RPL39P62891 AC068137.2-201ENST00000605408 478 ntBASIC10.88□□□□□ -0.67
RPL39P62891 MIR7706-201ENST00000613747 67 ntBASIC10.88□□□□□ -0.67
RPL39P62891 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
RPL39P62891 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RPL39P62891 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC10.88□□□□□ -0.67
RPL39P62891 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
RPL39P62891 AC005252.3-201ENST00000623855 2258 ntBASIC10.88□□□□□ -0.67
RPL39P62891 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RPL39P62891 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC10.88□□□□□ -0.67
RPL39P62891 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
RPL39P62891 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC10.88□□□□□ -0.67
RPL39P62891 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RPL39P62891 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RPL39P62891 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
RPL39P62891 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
RPL39P62891 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RPL39P62891 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
RPL39P62891 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RPL39P62891 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC10.88□□□□□ -0.67
RPL39P62891 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
RPL39P62891 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RPL39P62891 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
RPL39P62891 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RPL39P62891 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
RPL39P62891 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC10.87□□□□□ -0.67
RPL39P62891 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
RPL39P62891 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC10.87□□□□□ -0.67
RPL39P62891 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms