Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN20P56880 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN20P56880 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN20P56880 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN20P56880 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN20P56880 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN20P56880 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
CLDN20P56880 AL121723.1-201ENST00000445194 1519 ntBASIC14.1□□□□□ -0.15
CLDN20P56880 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN20P56880 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN20P56880 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CLDN20P56880 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN20P56880 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN20P56880 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN20P56880 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN20P56880 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.09□□□□□ -0.15
CLDN20P56880 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.09□□□□□ -0.15
CLDN20P56880 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.09□□□□□ -0.15
CLDN20P56880 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.09□□□□□ -0.15
CLDN20P56880 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CLDN20P56880 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN20P56880 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN20P56880 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN20P56880 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN20P56880 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN20P56880 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CLDN20P56880 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.09□□□□□ -0.15
CLDN20P56880 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN20P56880 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CLDN20P56880 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN20P56880 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN20P56880 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.09□□□□□ -0.15
CLDN20P56880 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.09□□□□□ -0.15
CLDN20P56880 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CLDN20P56880 RN7SL692P-201ENST00000464677 288 ntBASIC14.09□□□□□ -0.15
CLDN20P56880 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.09□□□□□ -0.15
CLDN20P56880 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.09□□□□□ -0.15
CLDN20P56880 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CLDN20P56880 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.09□□□□□ -0.15
CLDN20P56880 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.09□□□□□ -0.15
CLDN20P56880 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.09□□□□□ -0.15
CLDN20P56880 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.09□□□□□ -0.15
CLDN20P56880 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN20P56880 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.09□□□□□ -0.15
CLDN20P56880 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN20P56880 AC126755.1-201ENST00000525846 6405 ntBASIC14.09□□□□□ -0.15
CLDN20P56880 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.09□□□□□ -0.15
CLDN20P56880 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN20P56880 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN20P56880 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN20P56880 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN20P56880 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.09□□□□□ -0.15
CLDN20P56880 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN20P56880 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN20P56880 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN20P56880 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN20P56880 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN20P56880 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN20P56880 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN20P56880 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CLDN20P56880 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN20P56880 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.09□□□□□ -0.15
CLDN20P56880 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN20P56880 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CLDN20P56880 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CLDN20P56880 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
CLDN20P56880 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CLDN20P56880 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
CLDN20P56880 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.08□□□□□ -0.15
CLDN20P56880 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
CLDN20P56880 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.08□□□□□ -0.16
CLDN20P56880 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN20P56880 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN20P56880 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.08□□□□□ -0.16
CLDN20P56880 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN20P56880 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN20P56880 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.08□□□□□ -0.16
CLDN20P56880 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CLDN20P56880 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CLDN20P56880 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.08□□□□□ -0.16
CLDN20P56880 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
CLDN20P56880 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CLDN20P56880 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.08□□□□□ -0.16
CLDN20P56880 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN20P56880 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.08□□□□□ -0.16
CLDN20P56880 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CLDN20P56880 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.08□□□□□ -0.16
CLDN20P56880 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.08□□□□□ -0.16
CLDN20P56880 KRT18P43-201ENST00000469825 1281 ntBASIC14.08□□□□□ -0.16
CLDN20P56880 FAM86LP-201ENST00000478302 853 ntBASIC14.08□□□□□ -0.16
CLDN20P56880 ELK1P1-201ENST00000485699 580 ntBASIC14.08□□□□□ -0.16
CLDN20P56880 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN20P56880 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.08□□□□□ -0.16
CLDN20P56880 AL596325.1-201ENST00000563991 1082 ntBASIC14.08□□□□□ -0.16
CLDN20P56880 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.08□□□□□ -0.16
CLDN20P56880 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN20P56880 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN20P56880 CTBP2P3-201ENST00000585629 1255 ntBASIC14.08□□□□□ -0.16
CLDN20P56880 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.08□□□□□ -0.16
CLDN20P56880 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms