Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH11P55287 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH11P55287 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDH11P55287 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH11P55287 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH11P55287 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CDH11P55287 AL035456.1-201ENST00000456064 1369 ntBASIC14.11□□□□□ -0.15
CDH11P55287 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH11P55287 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH11P55287 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CDH11P55287 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH11P55287 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDH11P55287 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH11P55287 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH11P55287 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDH11P55287 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH11P55287 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH11P55287 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDH11P55287 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH11P55287 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH11P55287 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDH11P55287 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH11P55287 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDH11P55287 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDH11P55287 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CDH11P55287 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH11P55287 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH11P55287 EEF1DP4-201ENST00000446006 880 ntBASIC14.11□□□□□ -0.15
CDH11P55287 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.11□□□□□ -0.15
CDH11P55287 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDH11P55287 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CDH11P55287 AC138761.1-201ENST00000584393 385 ntBASIC14.11□□□□□ -0.15
CDH11P55287 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH11P55287 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH11P55287 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH11P55287 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH11P55287 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH11P55287 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH11P55287 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CDH11P55287 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH11P55287 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH11P55287 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH11P55287 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH11P55287 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH11P55287 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH11P55287 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH11P55287 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CDH11P55287 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH11P55287 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH11P55287 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH11P55287 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH11P55287 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH11P55287 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH11P55287 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.1□□□□□ -0.15
CDH11P55287 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH11P55287 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDH11P55287 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.1□□□□□ -0.15
CDH11P55287 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH11P55287 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH11P55287 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CDH11P55287 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH11P55287 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDH11P55287 CICP14-201ENST00000629111 2732 ntBASIC14.1□□□□□ -0.15
CDH11P55287 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH11P55287 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH11P55287 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH11P55287 AC100757.3-201ENST00000622361 1406 ntBASIC14.1□□□□□ -0.15
CDH11P55287 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH11P55287 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.1□□□□□ -0.15
CDH11P55287 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDH11P55287 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH11P55287 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH11P55287 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDH11P55287 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.1□□□□□ -0.15
CDH11P55287 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CDH11P55287 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH11P55287 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH11P55287 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.1□□□□□ -0.15
CDH11P55287 AC236430.1-201ENST00000402231 743 ntBASIC14.1□□□□□ -0.15
CDH11P55287 RPL5P21-201ENST00000404620 815 ntBASIC14.1□□□□□ -0.15
CDH11P55287 AC002472.2-201ENST00000442739 958 ntBASIC14.1□□□□□ -0.15
CDH11P55287 UGT1A2P-201ENST00000454886 866 ntBASIC14.1□□□□□ -0.15
CDH11P55287 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.1□□□□□ -0.15
CDH11P55287 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDH11P55287 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDH11P55287 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.1□□□□□ -0.15
CDH11P55287 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.1□□□□□ -0.15
CDH11P55287 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.1□□□□□ -0.15
CDH11P55287 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.1□□□□□ -0.15
CDH11P55287 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDH11P55287 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.1□□□□□ -0.15
CDH11P55287 AC097359.3-201ENST00000603982 1210 ntBASIC14.1□□□□□ -0.15
CDH11P55287 AL138828.2-201ENST00000615812 383 ntBASIC14.1□□□□□ -0.15
CDH11P55287 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.1□□□□□ -0.15
CDH11P55287 INTS4P1-203ENST00000641008 3683 ntBASIC14.1□□□□□ -0.15
CDH11P55287 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH11P55287 AC140479.7-201ENST00000636301 2332 ntBASIC14.1□□□□□ -0.15
CDH11P55287 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH11P55287 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH11P55287 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms