Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
NR1H2P55055 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.64□□□□□ -0.07
NR1H2P55055 AC091167.2-201ENST00000579581 588 ntBASIC14.64□□□□□ -0.07
NR1H2P55055 AC011467.4-201ENST00000594891 528 ntBASIC14.64□□□□□ -0.07
NR1H2P55055 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
NR1H2P55055 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H2P55055 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H2P55055 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.64□□□□□ -0.07
NR1H2P55055 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H2P55055 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
NR1H2P55055 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H2P55055 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H2P55055 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H2P55055 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H2P55055 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H2P55055 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H2P55055 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H2P55055 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.64□□□□□ -0.07
NR1H2P55055 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.64□□□□□ -0.07
NR1H2P55055 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H2P55055 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H2P55055 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H2P55055 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H2P55055 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H2P55055 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.63□□□□□ -0.07
NR1H2P55055 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
NR1H2P55055 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
NR1H2P55055 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H2P55055 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H2P55055 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H2P55055 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H2P55055 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
NR1H2P55055 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.63□□□□□ -0.07
NR1H2P55055 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H2P55055 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.63□□□□□ -0.07
NR1H2P55055 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
NR1H2P55055 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
NR1H2P55055 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.63□□□□□ -0.07
NR1H2P55055 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.63□□□□□ -0.07
NR1H2P55055 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.63□□□□□ -0.07
NR1H2P55055 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.63□□□□□ -0.07
NR1H2P55055 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.63□□□□□ -0.07
NR1H2P55055 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.63□□□□□ -0.07
NR1H2P55055 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.63□□□□□ -0.07
NR1H2P55055 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.63□□□□□ -0.07
NR1H2P55055 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
NR1H2P55055 RARRES2P8-201ENST00000566335 367 ntBASIC14.63□□□□□ -0.07
NR1H2P55055 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.63□□□□□ -0.07
NR1H2P55055 CYP2A7P1-201ENST00000595391 815 ntBASIC14.63□□□□□ -0.07
NR1H2P55055 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.63□□□□□ -0.07
NR1H2P55055 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.63□□□□□ -0.07
NR1H2P55055 AP001350.2-201ENST00000625104 1094 ntBASIC14.63□□□□□ -0.07
NR1H2P55055 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.63□□□□□ -0.07
NR1H2P55055 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H2P55055 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H2P55055 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
NR1H2P55055 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H2P55055 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.63□□□□□ -0.07
NR1H2P55055 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
NR1H2P55055 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.63□□□□□ -0.07
NR1H2P55055 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H2P55055 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.63□□□□□ -0.07
NR1H2P55055 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.63□□□□□ -0.07
NR1H2P55055 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.63□□□□□ -0.07
NR1H2P55055 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H2P55055 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H2P55055 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H2P55055 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H2P55055 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H2P55055 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
NR1H2P55055 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.63□□□□□ -0.07
NR1H2P55055 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H2P55055 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H2P55055 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H2P55055 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H2P55055 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
NR1H2P55055 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.62□□□□□ -0.07
NR1H2P55055 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H2P55055 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.62□□□□□ -0.07
NR1H2P55055 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H2P55055 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H2P55055 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.62□□□□□ -0.07
NR1H2P55055 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
NR1H2P55055 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.62□□□□□ -0.07
NR1H2P55055 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
NR1H2P55055 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H2P55055 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H2P55055 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NR1H2P55055 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H2P55055 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
NR1H2P55055 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H2P55055 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.62□□□□□ -0.07
NR1H2P55055 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NR1H2P55055 AC005237.2-201ENST00000434368 219 ntBASIC14.62□□□□□ -0.07
NR1H2P55055 FAM86GP-201ENST00000448322 971 ntBASIC14.62□□□□□ -0.07
NR1H2P55055 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.62□□□□□ -0.07
NR1H2P55055 AC067863.1-201ENST00000494933 530 ntBASIC14.62□□□□□ -0.07
NR1H2P55055 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
NR1H2P55055 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H2P55055 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms