Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.85■□□□□ 0.29
PMS1P54277 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.85■□□□□ 0.29
PMS1P54277 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.85■□□□□ 0.29
PMS1P54277 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PMS1P54277 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PMS1P54277 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PMS1P54277 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PMS1P54277 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PMS1P54277 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
PMS1P54277 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PMS1P54277 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.85■□□□□ 0.29
PMS1P54277 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PMS1P54277 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PMS1P54277 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
PMS1P54277 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PMS1P54277 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PMS1P54277 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PMS1P54277 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PMS1P54277 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PMS1P54277 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PMS1P54277 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.84■□□□□ 0.29
PMS1P54277 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.84■□□□□ 0.29
PMS1P54277 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PMS1P54277 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PMS1P54277 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PMS1P54277 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PMS1P54277 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.84■□□□□ 0.29
PMS1P54277 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
PMS1P54277 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.84■□□□□ 0.29
PMS1P54277 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PMS1P54277 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.84■□□□□ 0.29
PMS1P54277 UGT1A2P-201ENST00000454886 866 ntBASIC16.84■□□□□ 0.29
PMS1P54277 AC092183.1-201ENST00000469884 875 ntBASIC16.84■□□□□ 0.29
PMS1P54277 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.84■□□□□ 0.29
PMS1P54277 DOC2GP-202ENST00000514950 1163 ntBASIC16.84■□□□□ 0.29
PMS1P54277 RFPL4AP1-201ENST00000530883 850 ntBASIC16.84■□□□□ 0.29
PMS1P54277 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.84■□□□□ 0.29
PMS1P54277 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.84■□□□□ 0.29
PMS1P54277 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PMS1P54277 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PMS1P54277 AC107373.2-201ENST00000607735 490 ntBASIC16.84■□□□□ 0.29
PMS1P54277 MIR8072-201ENST00000614241 80 ntBASIC16.84■□□□□ 0.29
PMS1P54277 AC093525.8-201ENST00000624099 1342 ntBASIC16.84■□□□□ 0.29
PMS1P54277 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PMS1P54277 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PMS1P54277 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
PMS1P54277 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PMS1P54277 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PMS1P54277 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PMS1P54277 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PMS1P54277 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PMS1P54277 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.84■□□□□ 0.29
PMS1P54277 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
PMS1P54277 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PMS1P54277 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PMS1P54277 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PMS1P54277 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PMS1P54277 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PMS1P54277 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PMS1P54277 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PMS1P54277 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PMS1P54277 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PMS1P54277 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.83■□□□□ 0.28
PMS1P54277 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.83■□□□□ 0.28
PMS1P54277 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
PMS1P54277 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PMS1P54277 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.83■□□□□ 0.28
PMS1P54277 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PMS1P54277 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PMS1P54277 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.83■□□□□ 0.28
PMS1P54277 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PMS1P54277 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PMS1P54277 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PMS1P54277 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PMS1P54277 RN7SL399P-201ENST00000471648 279 ntBASIC16.83■□□□□ 0.28
PMS1P54277 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PMS1P54277 AC093214.1-201ENST00000511688 1107 ntBASIC16.83■□□□□ 0.28
PMS1P54277 AC026410.3-201ENST00000514280 936 ntBASIC16.83■□□□□ 0.28
PMS1P54277 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PMS1P54277 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.83■□□□□ 0.28
PMS1P54277 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
PMS1P54277 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PMS1P54277 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.83■□□□□ 0.28
PMS1P54277 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.83■□□□□ 0.28
PMS1P54277 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.83■□□□□ 0.28
PMS1P54277 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.83■□□□□ 0.28
PMS1P54277 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.83■□□□□ 0.28
PMS1P54277 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.83■□□□□ 0.28
PMS1P54277 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.83■□□□□ 0.28
PMS1P54277 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PMS1P54277 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PMS1P54277 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PMS1P54277 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
PMS1P54277 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PMS1P54277 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PMS1P54277 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PMS1P54277 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PMS1P54277 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMS1P54277 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMS1P54277 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms