Protein–RNA interactions for Protein: P52951

GBX2, Homeobox protein GBX-2, humanhuman

Predicted RBP Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBX2P52951 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.72□□□□□ -0.21
GBX2P52951 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GBX2P52951 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GBX2P52951 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
GBX2P52951 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.72□□□□□ -0.21
GBX2P52951 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
GBX2P52951 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
GBX2P52951 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GBX2P52951 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.72□□□□□ -0.21
GBX2P52951 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GBX2P52951 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GBX2P52951 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
GBX2P52951 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GBX2P52951 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
GBX2P52951 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GBX2P52951 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GBX2P52951 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GBX2P52951 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GBX2P52951 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GBX2P52951 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GBX2P52951 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.72□□□□□ -0.21
GBX2P52951 SPCS2P4-201ENST00000436160 681 ntBASIC13.72□□□□□ -0.21
GBX2P52951 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GBX2P52951 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.72□□□□□ -0.21
GBX2P52951 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GBX2P52951 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.72□□□□□ -0.21
GBX2P52951 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.72□□□□□ -0.21
GBX2P52951 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
GBX2P52951 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.72□□□□□ -0.21
GBX2P52951 AC243562.1-201ENST00000560672 389 ntBASIC13.72□□□□□ -0.21
GBX2P52951 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.72□□□□□ -0.21
GBX2P52951 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.72□□□□□ -0.21
GBX2P52951 AC092865.6-201ENST00000642101 219 ntBASIC13.72□□□□□ -0.21
GBX2P52951 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GBX2P52951 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
GBX2P52951 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
GBX2P52951 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.72□□□□□ -0.21
GBX2P52951 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
GBX2P52951 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
GBX2P52951 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
GBX2P52951 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.72□□□□□ -0.21
GBX2P52951 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
GBX2P52951 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GBX2P52951 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GBX2P52951 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.72□□□□□ -0.21
GBX2P52951 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.72□□□□□ -0.21
GBX2P52951 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
GBX2P52951 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
GBX2P52951 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GBX2P52951 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GBX2P52951 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
GBX2P52951 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
GBX2P52951 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
GBX2P52951 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GBX2P52951 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.71□□□□□ -0.21
GBX2P52951 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GBX2P52951 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GBX2P52951 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
GBX2P52951 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GBX2P52951 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GBX2P52951 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GBX2P52951 HLA-A-201ENST00000376802 1334 ntBASIC13.71□□□□□ -0.21
GBX2P52951 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.71□□□□□ -0.21
GBX2P52951 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GBX2P52951 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
GBX2P52951 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GBX2P52951 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.71□□□□□ -0.21
GBX2P52951 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
GBX2P52951 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GBX2P52951 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GBX2P52951 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.71□□□□□ -0.21
GBX2P52951 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GBX2P52951 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GBX2P52951 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GBX2P52951 FO393414.2-201ENST00000405153 598 ntBASIC13.71□□□□□ -0.21
GBX2P52951 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC13.71□□□□□ -0.21
GBX2P52951 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.71□□□□□ -0.21
GBX2P52951 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.71□□□□□ -0.21
GBX2P52951 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GBX2P52951 RPL13AP23-201ENST00000480739 586 ntBASIC13.71□□□□□ -0.21
GBX2P52951 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.71□□□□□ -0.21
GBX2P52951 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.71□□□□□ -0.21
GBX2P52951 AP000845.1-201ENST00000581677 2131 ntBASIC13.71□□□□□ -0.21
GBX2P52951 SLC25A6P4-201ENST00000586535 553 ntBASIC13.71□□□□□ -0.21
GBX2P52951 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.71□□□□□ -0.21
GBX2P52951 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.71□□□□□ -0.21
GBX2P52951 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.71□□□□□ -0.21
GBX2P52951 AC026120.1-201ENST00000611536 926 ntBASIC13.71□□□□□ -0.21
GBX2P52951 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC13.71□□□□□ -0.21
GBX2P52951 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.71□□□□□ -0.21
GBX2P52951 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GBX2P52951 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GBX2P52951 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
GBX2P52951 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GBX2P52951 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GBX2P52951 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
GBX2P52951 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GBX2P52951 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.71□□□□□ -0.21
GBX2P52951 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GBX2P52951 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms