Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 LDHBP1-201ENST00000455730 1119 ntBASIC18.6■□□□□ 0.57
NUP98P52948 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC18.6■□□□□ 0.57
NUP98P52948 AC242376.1-201ENST00000559033 726 ntBASIC18.6■□□□□ 0.57
NUP98P52948 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC18.6■□□□□ 0.57
NUP98P52948 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NUP98P52948 AC027601.3-201ENST00000622907 509 ntBASIC18.6■□□□□ 0.57
NUP98P52948 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
NUP98P52948 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUP98P52948 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NUP98P52948 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NUP98P52948 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NUP98P52948 KHSRPP1-201ENST00000427983 1768 ntBASIC18.6■□□□□ 0.57
NUP98P52948 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.6■□□□□ 0.57
NUP98P52948 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
NUP98P52948 AC144522.1-201ENST00000625111 1658 ntBASIC18.6■□□□□ 0.57
NUP98P52948 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUP98P52948 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
NUP98P52948 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NUP98P52948 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
NUP98P52948 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
NUP98P52948 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
NUP98P52948 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC18.6■□□□□ 0.57
NUP98P52948 FAS-202ENST00000352159 1722 ntTSL 5 BASIC18.6■□□□□ 0.57
NUP98P52948 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUP98P52948 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUP98P52948 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NUP98P52948 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC18.6■□□□□ 0.57
NUP98P52948 AC015909.3-201ENST00000572855 1794 ntBASIC18.6■□□□□ 0.57
NUP98P52948 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUP98P52948 TMBIM7P-202ENST00000641474 1516 ntBASIC18.6■□□□□ 0.57
NUP98P52948 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.6■□□□□ 0.57
NUP98P52948 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUP98P52948 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC18.6■□□□□ 0.57
NUP98P52948 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC18.6■□□□□ 0.57
NUP98P52948 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC18.6■□□□□ 0.57
NUP98P52948 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC18.6■□□□□ 0.57
NUP98P52948 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC18.6■□□□□ 0.57
NUP98P52948 IQSEC3P1-201ENST00000538799 536 ntBASIC18.6■□□□□ 0.57
NUP98P52948 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC18.6■□□□□ 0.57
NUP98P52948 AP003419.4-201ENST00000616071 517 ntBASIC18.6■□□□□ 0.57
NUP98P52948 AC006453.1-201ENST00000636037 1257 ntBASIC18.6■□□□□ 0.57
NUP98P52948 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC18.6■□□□□ 0.57
NUP98P52948 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUP98P52948 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUP98P52948 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
NUP98P52948 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUP98P52948 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NUP98P52948 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.6■□□□□ 0.57
NUP98P52948 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUP98P52948 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUP98P52948 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUP98P52948 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC18.59■□□□□ 0.57
NUP98P52948 AC092978.1-202ENST00000637590 1327 ntBASIC18.59■□□□□ 0.57
NUP98P52948 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.59■□□□□ 0.57
NUP98P52948 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUP98P52948 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUP98P52948 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUP98P52948 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUP98P52948 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.59■□□□□ 0.57
NUP98P52948 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.59■□□□□ 0.57
NUP98P52948 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUP98P52948 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUP98P52948 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NUP98P52948 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NUP98P52948 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUP98P52948 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUP98P52948 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUP98P52948 OR2K2-202ENST00000374428 1038 ntBASIC18.59■□□□□ 0.57
NUP98P52948 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC18.59■□□□□ 0.57
NUP98P52948 XBP1P1-201ENST00000436573 652 ntBASIC18.59■□□□□ 0.57
NUP98P52948 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC18.59■□□□□ 0.57
NUP98P52948 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC18.59■□□□□ 0.57
NUP98P52948 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC18.59■□□□□ 0.57
NUP98P52948 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC18.59■□□□□ 0.57
NUP98P52948 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC18.59■□□□□ 0.57
NUP98P52948 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.59■□□□□ 0.57
NUP98P52948 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUP98P52948 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUP98P52948 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
NUP98P52948 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
NUP98P52948 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
NUP98P52948 AC006480.2-201ENST00000609770 1337 ntBASIC18.59■□□□□ 0.57
NUP98P52948 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
NUP98P52948 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.59■□□□□ 0.57
NUP98P52948 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC18.59■□□□□ 0.57
NUP98P52948 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUP98P52948 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NUP98P52948 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NUP98P52948 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NUP98P52948 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
NUP98P52948 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
NUP98P52948 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
NUP98P52948 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NUP98P52948 RPL17P11-201ENST00000417593 544 ntBASIC18.58■□□□□ 0.57
NUP98P52948 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC18.58■□□□□ 0.57
NUP98P52948 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC18.58■□□□□ 0.57
NUP98P52948 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
NUP98P52948 NAT9-211ENST00000580632 799 ntTSL 3 BASIC18.58■□□□□ 0.57
NUP98P52948 RPL17P45-201ENST00000586289 509 ntBASIC18.58■□□□□ 0.57
NUP98P52948 HPN-206ENST00000597419 1212 ntTSL 5 BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms