Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SRP9P49458 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SRP9P49458 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SRP9P49458 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
SRP9P49458 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SRP9P49458 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SRP9P49458 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.69□□□□□ -0.22
SRP9P49458 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.69□□□□□ -0.22
SRP9P49458 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SRP9P49458 AC007326.2-201ENST00000624224 7579 ntBASIC13.69□□□□□ -0.22
SRP9P49458 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
SRP9P49458 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SRP9P49458 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SRP9P49458 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SRP9P49458 AC134407.2-201ENST00000625089 1978 ntBASIC13.69□□□□□ -0.22
SRP9P49458 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SRP9P49458 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRP9P49458 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SRP9P49458 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.68□□□□□ -0.22
SRP9P49458 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SRP9P49458 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRP9P49458 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRP9P49458 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRP9P49458 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
SRP9P49458 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SRP9P49458 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRP9P49458 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.68□□□□□ -0.22
SRP9P49458 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
SRP9P49458 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.68□□□□□ -0.22
SRP9P49458 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRP9P49458 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRP9P49458 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SRP9P49458 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRP9P49458 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SRP9P49458 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRP9P49458 AC004987.2-201ENST00000395959 1148 ntBASIC13.68□□□□□ -0.22
SRP9P49458 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SRP9P49458 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.68□□□□□ -0.22
SRP9P49458 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRP9P49458 AC107890.1-201ENST00000422478 521 ntBASIC13.68□□□□□ -0.22
SRP9P49458 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRP9P49458 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.68□□□□□ -0.22
SRP9P49458 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRP9P49458 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRP9P49458 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.68□□□□□ -0.22
SRP9P49458 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRP9P49458 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
SRP9P49458 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRP9P49458 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.68□□□□□ -0.22
SRP9P49458 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.68□□□□□ -0.22
SRP9P49458 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SRP9P49458 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.68□□□□□ -0.22
SRP9P49458 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRP9P49458 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SRP9P49458 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SRP9P49458 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRP9P49458 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SRP9P49458 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
SRP9P49458 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRP9P49458 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SRP9P49458 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SRP9P49458 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRP9P49458 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRP9P49458 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRP9P49458 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SRP9P49458 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SRP9P49458 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRP9P49458 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRP9P49458 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRP9P49458 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRP9P49458 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
SRP9P49458 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.67□□□□□ -0.22
SRP9P49458 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRP9P49458 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRP9P49458 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRP9P49458 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SRP9P49458 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SRP9P49458 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRP9P49458 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRP9P49458 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRP9P49458 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRP9P49458 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
SRP9P49458 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRP9P49458 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SRP9P49458 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.67□□□□□ -0.22
SRP9P49458 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.67□□□□□ -0.22
SRP9P49458 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SRP9P49458 CICP20-201ENST00000443330 2801 ntBASIC13.67□□□□□ -0.22
SRP9P49458 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SRP9P49458 CETN4P-206ENST00000642099 2168 ntBASIC13.67□□□□□ -0.22
SRP9P49458 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SRP9P49458 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SRP9P49458 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRP9P49458 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SRP9P49458 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SRP9P49458 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRP9P49458 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRP9P49458 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.67□□□□□ -0.22
SRP9P49458 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRP9P49458 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms