Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 IMPDH1P4-201ENST00000445028 1534 ntBASIC14□□□□□ -0.17
CENPAP49450 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CENPAP49450 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CENPAP49450 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CENPAP49450 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
CENPAP49450 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.99□□□□□ -0.17
CENPAP49450 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CENPAP49450 AC092053.3-201ENST00000641308 4975 ntBASIC13.99□□□□□ -0.17
CENPAP49450 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 AL035456.1-201ENST00000456064 1369 ntBASIC13.99□□□□□ -0.17
CENPAP49450 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.99□□□□□ -0.17
CENPAP49450 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.99□□□□□ -0.17
CENPAP49450 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CENPAP49450 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.99□□□□□ -0.17
CENPAP49450 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.99□□□□□ -0.17
CENPAP49450 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.99□□□□□ -0.17
CENPAP49450 SPDYE17-201ENST00000412399 783 ntBASIC13.99□□□□□ -0.17
CENPAP49450 UPF3AP3-201ENST00000420996 769 ntBASIC13.99□□□□□ -0.17
CENPAP49450 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.99□□□□□ -0.17
CENPAP49450 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CENPAP49450 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CENPAP49450 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.99□□□□□ -0.17
CENPAP49450 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.99□□□□□ -0.17
CENPAP49450 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
CENPAP49450 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CENPAP49450 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.99□□□□□ -0.17
CENPAP49450 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.99□□□□□ -0.17
CENPAP49450 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.99□□□□□ -0.17
CENPAP49450 MROH4P-201ENST00000431302 1578 ntBASIC13.99□□□□□ -0.17
CENPAP49450 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CENPAP49450 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.99□□□□□ -0.17
CENPAP49450 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.99□□□□□ -0.17
CENPAP49450 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
CENPAP49450 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CENPAP49450 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CENPAP49450 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CENPAP49450 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC13.98□□□□□ -0.17
CENPAP49450 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CENPAP49450 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.98□□□□□ -0.17
CENPAP49450 AC023024.2-201ENST00000623561 1993 ntBASIC13.98□□□□□ -0.17
CENPAP49450 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CENPAP49450 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC13.98□□□□□ -0.17
CENPAP49450 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CENPAP49450 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CENPAP49450 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.98□□□□□ -0.17
CENPAP49450 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.98□□□□□ -0.17
CENPAP49450 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CENPAP49450 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CENPAP49450 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CENPAP49450 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CENPAP49450 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CENPAP49450 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CENPAP49450 RPSAP43-201ENST00000402237 625 ntBASIC13.98□□□□□ -0.17
CENPAP49450 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.98□□□□□ -0.17
CENPAP49450 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.98□□□□□ -0.17
CENPAP49450 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.98□□□□□ -0.17
CENPAP49450 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.98□□□□□ -0.17
CENPAP49450 AC023141.5-201ENST00000458585 616 ntBASIC13.98□□□□□ -0.17
CENPAP49450 YBX1P5-201ENST00000509441 847 ntBASIC13.98□□□□□ -0.17
CENPAP49450 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.98□□□□□ -0.17
CENPAP49450 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CENPAP49450 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.98□□□□□ -0.17
CENPAP49450 SNHG9-202ENST00000564014 471 ntBASIC13.98□□□□□ -0.17
CENPAP49450 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms