Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CBX5P45973 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CBX5P45973 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CBX5P45973 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CBX5P45973 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CBX5P45973 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13.3□□□□□ -0.28
CBX5P45973 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CBX5P45973 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.3□□□□□ -0.28
CBX5P45973 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.3□□□□□ -0.28
CBX5P45973 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CBX5P45973 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CBX5P45973 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CBX5P45973 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CBX5P45973 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CBX5P45973 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.3□□□□□ -0.28
CBX5P45973 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.3□□□□□ -0.28
CBX5P45973 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CBX5P45973 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CBX5P45973 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.3□□□□□ -0.28
CBX5P45973 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CBX5P45973 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CBX5P45973 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CBX5P45973 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CBX5P45973 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CBX5P45973 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CBX5P45973 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CBX5P45973 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CBX5P45973 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CBX5P45973 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CBX5P45973 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.29□□□□□ -0.28
CBX5P45973 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CBX5P45973 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CBX5P45973 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.29□□□□□ -0.28
CBX5P45973 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.29□□□□□ -0.28
CBX5P45973 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CBX5P45973 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CBX5P45973 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CBX5P45973 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CBX5P45973 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.29□□□□□ -0.28
CBX5P45973 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.29□□□□□ -0.28
CBX5P45973 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.29□□□□□ -0.28
CBX5P45973 AC092910.1-201ENST00000482027 1129 ntBASIC13.29□□□□□ -0.28
CBX5P45973 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CBX5P45973 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.29□□□□□ -0.28
CBX5P45973 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.29□□□□□ -0.28
CBX5P45973 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.29□□□□□ -0.28
CBX5P45973 AL031008.1-201ENST00000619963 541 ntBASIC13.29□□□□□ -0.28
CBX5P45973 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CBX5P45973 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CBX5P45973 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CBX5P45973 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CBX5P45973 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CBX5P45973 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CBX5P45973 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CBX5P45973 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CBX5P45973 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CBX5P45973 CICP11-201ENST00000434745 2827 ntBASIC13.29□□□□□ -0.28
CBX5P45973 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CBX5P45973 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.29□□□□□ -0.28
CBX5P45973 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13.29□□□□□ -0.28
CBX5P45973 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CBX5P45973 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CBX5P45973 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CBX5P45973 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CBX5P45973 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CBX5P45973 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CBX5P45973 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CBX5P45973 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CBX5P45973 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CBX5P45973 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CBX5P45973 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CBX5P45973 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CBX5P45973 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CBX5P45973 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CBX5P45973 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CBX5P45973 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CBX5P45973 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.28□□□□□ -0.28
CBX5P45973 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CBX5P45973 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.28□□□□□ -0.28
CBX5P45973 EEF1DP4-201ENST00000446006 880 ntBASIC13.28□□□□□ -0.28
CBX5P45973 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.28□□□□□ -0.28
CBX5P45973 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC13.28□□□□□ -0.28
CBX5P45973 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CBX5P45973 KRT18P35-201ENST00000510488 1269 ntBASIC13.28□□□□□ -0.28
CBX5P45973 SDHD-206ENST00000528182 754 ntTSL 3 BASIC13.28□□□□□ -0.28
CBX5P45973 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.28□□□□□ -0.28
CBX5P45973 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.28□□□□□ -0.28
CBX5P45973 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CBX5P45973 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC13.28□□□□□ -0.28
CBX5P45973 FAM215A-202ENST00000632077 792 ntBASIC13.28□□□□□ -0.28
CBX5P45973 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CBX5P45973 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CBX5P45973 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CBX5P45973 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CBX5P45973 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CBX5P45973 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CBX5P45973 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CBX5P45973 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CBX5P45973 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CBX5P45973 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms