Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TNFSF9P41273 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.5■□□□□ 0.23
TNFSF9P41273 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.5■□□□□ 0.23
TNFSF9P41273 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.5■□□□□ 0.23
TNFSF9P41273 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.5■□□□□ 0.23
TNFSF9P41273 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF9P41273 AC011270.2-201ENST00000624293 2550 ntBASIC16.5■□□□□ 0.23
TNFSF9P41273 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF9P41273 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.5■□□□□ 0.23
TNFSF9P41273 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF9P41273 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF9P41273 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF9P41273 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
TNFSF9P41273 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF9P41273 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF9P41273 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF9P41273 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF9P41273 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF9P41273 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF9P41273 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF9P41273 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.5■□□□□ 0.23
TNFSF9P41273 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.5■□□□□ 0.23
TNFSF9P41273 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.5■□□□□ 0.23
TNFSF9P41273 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.5■□□□□ 0.23
TNFSF9P41273 CNN2P8-201ENST00000421872 913 ntBASIC16.5■□□□□ 0.23
TNFSF9P41273 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.5■□□□□ 0.23
TNFSF9P41273 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.5■□□□□ 0.23
TNFSF9P41273 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
TNFSF9P41273 AP000812.2-201ENST00000538934 718 ntBASIC16.5■□□□□ 0.23
TNFSF9P41273 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.5■□□□□ 0.23
TNFSF9P41273 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.5■□□□□ 0.23
TNFSF9P41273 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.5■□□□□ 0.23
TNFSF9P41273 COX11-210ENST00000639671 696 ntBASIC16.5■□□□□ 0.23
TNFSF9P41273 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
TNFSF9P41273 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.5■□□□□ 0.23
TNFSF9P41273 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.5■□□□□ 0.23
TNFSF9P41273 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF9P41273 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF9P41273 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF9P41273 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.5■□□□□ 0.23
TNFSF9P41273 DBET-201ENST00000630918 3363 ntBASIC16.5■□□□□ 0.23
TNFSF9P41273 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.5■□□□□ 0.23
TNFSF9P41273 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.5■□□□□ 0.23
TNFSF9P41273 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF9P41273 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF9P41273 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.5■□□□□ 0.23
TNFSF9P41273 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.5■□□□□ 0.23
TNFSF9P41273 LILRP1-201ENST00000444199 1370 ntBASIC16.5■□□□□ 0.23
TNFSF9P41273 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.5■□□□□ 0.23
TNFSF9P41273 WASH3P-207ENST00000560956 1394 ntBASIC16.5■□□□□ 0.23
TNFSF9P41273 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.5■□□□□ 0.23
TNFSF9P41273 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF9P41273 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TNFSF9P41273 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF9P41273 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.49■□□□□ 0.23
TNFSF9P41273 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.49■□□□□ 0.23
TNFSF9P41273 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
TNFSF9P41273 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNFSF9P41273 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNFSF9P41273 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNFSF9P41273 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.49■□□□□ 0.23
TNFSF9P41273 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TNFSF9P41273 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNFSF9P41273 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNFSF9P41273 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNFSF9P41273 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNFSF9P41273 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNFSF9P41273 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNFSF9P41273 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.49■□□□□ 0.23
TNFSF9P41273 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.49■□□□□ 0.23
TNFSF9P41273 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.49■□□□□ 0.23
TNFSF9P41273 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.49■□□□□ 0.23
TNFSF9P41273 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNFSF9P41273 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.49■□□□□ 0.23
TNFSF9P41273 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
TNFSF9P41273 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNFSF9P41273 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNFSF9P41273 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNFSF9P41273 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.49■□□□□ 0.23
TNFSF9P41273 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNFSF9P41273 AC099336.1-201ENST00000417053 1171 ntBASIC16.49■□□□□ 0.23
TNFSF9P41273 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNFSF9P41273 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.49■□□□□ 0.23
TNFSF9P41273 AC026954.1-201ENST00000429771 1293 ntBASIC16.49■□□□□ 0.23
TNFSF9P41273 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TNFSF9P41273 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.49■□□□□ 0.23
TNFSF9P41273 KRT223P-202ENST00000449164 1292 ntBASIC16.49■□□□□ 0.23
TNFSF9P41273 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.49■□□□□ 0.23
TNFSF9P41273 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.49■□□□□ 0.23
TNFSF9P41273 AC026434.2-201ENST00000506094 1078 ntBASIC16.49■□□□□ 0.23
TNFSF9P41273 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.49■□□□□ 0.23
TNFSF9P41273 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.49■□□□□ 0.23
TNFSF9P41273 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.49■□□□□ 0.23
TNFSF9P41273 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.49■□□□□ 0.23
TNFSF9P41273 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.49■□□□□ 0.23
TNFSF9P41273 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.49■□□□□ 0.23
TNFSF9P41273 LINC00528-201ENST00000600723 2160 ntBASIC16.49■□□□□ 0.23
TNFSF9P41273 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.49■□□□□ 0.23
TNFSF9P41273 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TNFSF9P41273 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 249.6 ms