Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP8P40818 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
USP8P40818 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP8P40818 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
USP8P40818 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.79■□□□□ 0.28
USP8P40818 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.79■□□□□ 0.28
USP8P40818 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.79■□□□□ 0.28
USP8P40818 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.79■□□□□ 0.28
USP8P40818 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP8P40818 AC044860.1-202ENST00000559481 777 ntBASIC16.79■□□□□ 0.28
USP8P40818 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.79■□□□□ 0.28
USP8P40818 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.79■□□□□ 0.28
USP8P40818 AC093512.1-201ENST00000617969 520 ntBASIC16.79■□□□□ 0.28
USP8P40818 AL390754.1-201ENST00000619088 582 ntBASIC16.79■□□□□ 0.28
USP8P40818 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP8P40818 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP8P40818 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP8P40818 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP8P40818 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USP8P40818 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
USP8P40818 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USP8P40818 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP8P40818 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USP8P40818 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP8P40818 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP8P40818 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.79■□□□□ 0.28
USP8P40818 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP8P40818 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.79■□□□□ 0.28
USP8P40818 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.79■□□□□ 0.28
USP8P40818 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USP8P40818 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP8P40818 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP8P40818 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.78■□□□□ 0.28
USP8P40818 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP8P40818 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP8P40818 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP8P40818 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USP8P40818 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP8P40818 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USP8P40818 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP8P40818 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
USP8P40818 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
USP8P40818 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP8P40818 AL122018.1-201ENST00000446607 2310 ntBASIC16.78■□□□□ 0.28
USP8P40818 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
USP8P40818 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP8P40818 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP8P40818 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USP8P40818 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP8P40818 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.78■□□□□ 0.28
USP8P40818 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.78■□□□□ 0.28
USP8P40818 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.78■□□□□ 0.28
USP8P40818 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP8P40818 SDHAP3-202ENST00000515467 728 ntBASIC16.78■□□□□ 0.28
USP8P40818 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.78■□□□□ 0.28
USP8P40818 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.78■□□□□ 0.28
USP8P40818 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.78■□□□□ 0.28
USP8P40818 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.78■□□□□ 0.28
USP8P40818 AL158211.3-201ENST00000607385 239 ntBASIC16.78■□□□□ 0.28
USP8P40818 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.78■□□□□ 0.28
USP8P40818 AL590560.3-201ENST00000623350 461 ntBASIC16.78■□□□□ 0.28
USP8P40818 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.78■□□□□ 0.28
USP8P40818 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP8P40818 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP8P40818 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC16.78■□□□□ 0.28
USP8P40818 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
USP8P40818 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP8P40818 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USP8P40818 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.78■□□□□ 0.28
USP8P40818 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP8P40818 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP8P40818 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
USP8P40818 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP8P40818 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.78■□□□□ 0.28
USP8P40818 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
USP8P40818 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP8P40818 KRT8P44-201ENST00000441609 1350 ntBASIC16.77■□□□□ 0.28
USP8P40818 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
USP8P40818 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC16.77■□□□□ 0.28
USP8P40818 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP8P40818 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.77■□□□□ 0.28
USP8P40818 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.77■□□□□ 0.28
USP8P40818 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
USP8P40818 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
USP8P40818 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP8P40818 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP8P40818 AC087499.5-201ENST00000452760 1342 ntBASIC16.77■□□□□ 0.28
USP8P40818 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
USP8P40818 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.77■□□□□ 0.28
USP8P40818 CICP11-201ENST00000434745 2827 ntBASIC16.77■□□□□ 0.28
USP8P40818 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.77■□□□□ 0.28
USP8P40818 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
USP8P40818 ABR-205ENST00000544583 5595 ntTSL 2 BASIC16.77■□□□□ 0.28
USP8P40818 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.77■□□□□ 0.28
USP8P40818 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP8P40818 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
USP8P40818 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
USP8P40818 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.77■□□□□ 0.28
USP8P40818 AC074044.1-201ENST00000609673 707 ntBASIC16.77■□□□□ 0.28
USP8P40818 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms