Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC19.14■□□□□ 0.65
COL15A1P39059 CMC1-204ENST00000423894 549 ntTSL 2 BASIC19.14■□□□□ 0.65
COL15A1P39059 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL15A1P39059 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC19.14■□□□□ 0.65
COL15A1P39059 AC116345.2-201ENST00000512837 523 ntBASIC19.14■□□□□ 0.65
COL15A1P39059 AL160314.3-201ENST00000556041 767 ntBASIC19.14■□□□□ 0.65
COL15A1P39059 AC100827.2-201ENST00000563214 1194 ntBASIC19.14■□□□□ 0.65
COL15A1P39059 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL15A1P39059 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL15A1P39059 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC19.14■□□□□ 0.65
COL15A1P39059 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL15A1P39059 INE2-201ENST00000630399 1874 ntBASIC19.14■□□□□ 0.65
COL15A1P39059 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.14■□□□□ 0.65
COL15A1P39059 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC19.14■□□□□ 0.65
COL15A1P39059 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
COL15A1P39059 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
COL15A1P39059 SHC1P1-201ENST00000425230 1745 ntBASIC19.14■□□□□ 0.65
COL15A1P39059 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL15A1P39059 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC19.13■□□□□ 0.65
COL15A1P39059 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
COL15A1P39059 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL15A1P39059 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL15A1P39059 AC126365.1-201ENST00000578585 1514 ntBASIC19.13■□□□□ 0.65
COL15A1P39059 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.13■□□□□ 0.65
COL15A1P39059 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL15A1P39059 E2F3P2-201ENST00000447755 1422 ntBASIC19.13■□□□□ 0.65
COL15A1P39059 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
COL15A1P39059 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
COL15A1P39059 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL15A1P39059 AP003680.1-201ENST00000598970 3660 ntBASIC19.13■□□□□ 0.65
COL15A1P39059 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL15A1P39059 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL15A1P39059 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC19.13■□□□□ 0.65
COL15A1P39059 AL360270.3-201ENST00000609118 1348 ntBASIC19.13■□□□□ 0.65
COL15A1P39059 AC092978.1-202ENST00000637590 1327 ntBASIC19.13■□□□□ 0.65
COL15A1P39059 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL15A1P39059 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL15A1P39059 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL15A1P39059 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL15A1P39059 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
COL15A1P39059 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
COL15A1P39059 IGF1-203ENST00000392904 761 ntTSL 5 BASIC19.13■□□□□ 0.65
COL15A1P39059 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL15A1P39059 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL15A1P39059 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL15A1P39059 AC234782.1-201ENST00000451950 919 ntBASIC19.13■□□□□ 0.65
COL15A1P39059 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL15A1P39059 CDC23-208ENST00000505120 455 ntTSL 3 BASIC19.13■□□□□ 0.65
COL15A1P39059 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC19.13■□□□□ 0.65
COL15A1P39059 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC19.13■□□□□ 0.65
COL15A1P39059 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC19.13■□□□□ 0.65
COL15A1P39059 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
COL15A1P39059 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL15A1P39059 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.13■□□□□ 0.65
COL15A1P39059 AC011840.2-201ENST00000563063 1520 ntBASIC19.13■□□□□ 0.65
COL15A1P39059 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC19.13■□□□□ 0.65
COL15A1P39059 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC19.12■□□□□ 0.65
COL15A1P39059 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL15A1P39059 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL15A1P39059 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL15A1P39059 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC19.12■□□□□ 0.65
COL15A1P39059 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL15A1P39059 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL15A1P39059 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.12■□□□□ 0.65
COL15A1P39059 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL15A1P39059 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
COL15A1P39059 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL15A1P39059 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL15A1P39059 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL15A1P39059 ISCA2P1-201ENST00000425548 448 ntBASIC19.12■□□□□ 0.65
COL15A1P39059 PDIA3P2-201ENST00000428073 158 ntBASIC19.12■□□□□ 0.65
COL15A1P39059 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC19.12■□□□□ 0.65
COL15A1P39059 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC19.12■□□□□ 0.65
COL15A1P39059 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL15A1P39059 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC19.12■□□□□ 0.65
COL15A1P39059 CDK7-214ENST00000626796 358 ntTSL 5 BASIC19.12■□□□□ 0.65
COL15A1P39059 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC19.12■□□□□ 0.65
COL15A1P39059 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC19.12■□□□□ 0.65
COL15A1P39059 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
COL15A1P39059 REXO1L4P-201ENST00000605109 1937 ntBASIC19.12■□□□□ 0.65
COL15A1P39059 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL15A1P39059 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.12■□□□□ 0.65
COL15A1P39059 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
COL15A1P39059 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL15A1P39059 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL15A1P39059 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL15A1P39059 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
COL15A1P39059 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL15A1P39059 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
COL15A1P39059 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL15A1P39059 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC19.12■□□□□ 0.65
COL15A1P39059 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC19.12■□□□□ 0.65
COL15A1P39059 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC19.12■□□□□ 0.65
COL15A1P39059 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL15A1P39059 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL15A1P39059 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL15A1P39059 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL15A1P39059 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL15A1P39059 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL15A1P39059 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms