Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SCNN1AP37088 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SCNN1AP37088 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SCNN1AP37088 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SCNN1AP37088 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.86■□□□□ 0.13
SCNN1AP37088 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.86■□□□□ 0.13
SCNN1AP37088 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.86■□□□□ 0.13
SCNN1AP37088 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.86■□□□□ 0.13
SCNN1AP37088 AC120057.1-201ENST00000483947 663 ntBASIC15.86■□□□□ 0.13
SCNN1AP37088 AC026434.2-201ENST00000506094 1078 ntBASIC15.86■□□□□ 0.13
SCNN1AP37088 USP32P1-208ENST00000506594 1164 ntBASIC15.86■□□□□ 0.13
SCNN1AP37088 AP001889.1-201ENST00000525414 633 ntBASIC15.86■□□□□ 0.13
SCNN1AP37088 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.86■□□□□ 0.13
SCNN1AP37088 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.86■□□□□ 0.13
SCNN1AP37088 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.86■□□□□ 0.13
SCNN1AP37088 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.86■□□□□ 0.13
SCNN1AP37088 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.86■□□□□ 0.13
SCNN1AP37088 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SCNN1AP37088 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SCNN1AP37088 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.86■□□□□ 0.13
SCNN1AP37088 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SCNN1AP37088 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SCNN1AP37088 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SCNN1AP37088 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SCNN1AP37088 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SCNN1AP37088 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SCNN1AP37088 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SCNN1AP37088 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SCNN1AP37088 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SCNN1AP37088 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.86■□□□□ 0.13
SCNN1AP37088 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.86■□□□□ 0.13
SCNN1AP37088 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.85■□□□□ 0.13
SCNN1AP37088 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SCNN1AP37088 MSTO2P-201ENST00000314835 1709 ntBASIC15.85■□□□□ 0.13
SCNN1AP37088 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SCNN1AP37088 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
SCNN1AP37088 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SCNN1AP37088 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SCNN1AP37088 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SCNN1AP37088 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SCNN1AP37088 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SCNN1AP37088 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SCNN1AP37088 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.85■□□□□ 0.13
SCNN1AP37088 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.85■□□□□ 0.13
SCNN1AP37088 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.85■□□□□ 0.13
SCNN1AP37088 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SCNN1AP37088 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
SCNN1AP37088 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.85■□□□□ 0.13
SCNN1AP37088 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.85■□□□□ 0.13
SCNN1AP37088 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.85■□□□□ 0.13
SCNN1AP37088 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.85■□□□□ 0.13
SCNN1AP37088 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.85■□□□□ 0.13
SCNN1AP37088 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.85■□□□□ 0.13
SCNN1AP37088 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.85■□□□□ 0.13
SCNN1AP37088 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SCNN1AP37088 RN7SL48P-201ENST00000579283 293 ntBASIC15.85■□□□□ 0.13
SCNN1AP37088 LINC02084-201ENST00000606069 1096 ntBASIC15.85■□□□□ 0.13
SCNN1AP37088 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SCNN1AP37088 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SCNN1AP37088 AC103702.1-201ENST00000548801 2630 ntBASIC15.85■□□□□ 0.13
SCNN1AP37088 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.85■□□□□ 0.13
SCNN1AP37088 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SCNN1AP37088 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SCNN1AP37088 AL138709.1-201ENST00000614840 1693 ntBASIC15.85■□□□□ 0.13
SCNN1AP37088 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SCNN1AP37088 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SCNN1AP37088 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
SCNN1AP37088 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SCNN1AP37088 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SCNN1AP37088 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.85■□□□□ 0.13
SCNN1AP37088 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SCNN1AP37088 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.85■□□□□ 0.13
SCNN1AP37088 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SCNN1AP37088 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SCNN1AP37088 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SCNN1AP37088 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SCNN1AP37088 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SCNN1AP37088 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SCNN1AP37088 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SCNN1AP37088 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SCNN1AP37088 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCNN1AP37088 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.84■□□□□ 0.13
SCNN1AP37088 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.84■□□□□ 0.13
SCNN1AP37088 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCNN1AP37088 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCNN1AP37088 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCNN1AP37088 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.84■□□□□ 0.13
SCNN1AP37088 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SCNN1AP37088 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCNN1AP37088 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCNN1AP37088 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCNN1AP37088 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCNN1AP37088 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCNN1AP37088 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
SCNN1AP37088 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SCNN1AP37088 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCNN1AP37088 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SCNN1AP37088 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
SCNN1AP37088 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCNN1AP37088 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms