Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6BP35913 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6BP35913 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6BP35913 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6BP35913 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6BP35913 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6BP35913 FAM90A7P-201ENST00000382628 1395 ntBASIC18.65■□□□□ 0.58
PDE6BP35913 FAM90A23P-201ENST00000400136 1395 ntBASIC18.65■□□□□ 0.58
PDE6BP35913 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6BP35913 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6BP35913 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC18.65■□□□□ 0.58
PDE6BP35913 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.65■□□□□ 0.58
PDE6BP35913 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PDE6BP35913 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6BP35913 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PDE6BP35913 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
PDE6BP35913 MBLAC2-202ENST00000514906 1936 ntBASIC18.64■□□□□ 0.58
PDE6BP35913 AC011840.2-201ENST00000563063 1520 ntBASIC18.64■□□□□ 0.58
PDE6BP35913 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PDE6BP35913 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
PDE6BP35913 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PDE6BP35913 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PDE6BP35913 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6BP35913 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6BP35913 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6BP35913 AC244394.1-201ENST00000435000 1665 ntBASIC18.64■□□□□ 0.57
PDE6BP35913 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6BP35913 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6BP35913 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6BP35913 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PDE6BP35913 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6BP35913 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC18.64■□□□□ 0.57
PDE6BP35913 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC18.64■□□□□ 0.57
PDE6BP35913 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC18.64■□□□□ 0.57
PDE6BP35913 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC18.64■□□□□ 0.57
PDE6BP35913 KLF2P1-201ENST00000447438 1042 ntBASIC18.64■□□□□ 0.57
PDE6BP35913 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PDE6BP35913 RN7SL258P-201ENST00000478664 300 ntBASIC18.64■□□□□ 0.57
PDE6BP35913 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6BP35913 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC18.64■□□□□ 0.57
PDE6BP35913 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC18.64■□□□□ 0.57
PDE6BP35913 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC18.64■□□□□ 0.57
PDE6BP35913 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PDE6BP35913 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PDE6BP35913 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6BP35913 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
PDE6BP35913 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6BP35913 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
PDE6BP35913 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6BP35913 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6BP35913 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6BP35913 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.64■□□□□ 0.57
PDE6BP35913 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
PDE6BP35913 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.64■□□□□ 0.57
PDE6BP35913 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6BP35913 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6BP35913 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.64■□□□□ 0.57
PDE6BP35913 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6BP35913 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6BP35913 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PDE6BP35913 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6BP35913 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6BP35913 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.63■□□□□ 0.57
PDE6BP35913 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6BP35913 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PDE6BP35913 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6BP35913 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6BP35913 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6BP35913 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6BP35913 AC046158.3-201ENST00000624947 2558 ntBASIC18.63■□□□□ 0.57
PDE6BP35913 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6BP35913 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6BP35913 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6BP35913 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6BP35913 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6BP35913 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
PDE6BP35913 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC18.63■□□□□ 0.57
PDE6BP35913 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC18.63■□□□□ 0.57
PDE6BP35913 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PDE6BP35913 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PDE6BP35913 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC18.63■□□□□ 0.57
PDE6BP35913 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC18.63■□□□□ 0.57
PDE6BP35913 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6BP35913 AC009884.2-201ENST00000603110 324 ntBASIC18.63■□□□□ 0.57
PDE6BP35913 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6BP35913 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6BP35913 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PDE6BP35913 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6BP35913 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6BP35913 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6BP35913 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6BP35913 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6BP35913 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6BP35913 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC18.63■□□□□ 0.57
PDE6BP35913 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PDE6BP35913 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6BP35913 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PDE6BP35913 AC020910.5-201ENST00000623668 1865 ntBASIC18.63■□□□□ 0.57
PDE6BP35913 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.62■□□□□ 0.57
PDE6BP35913 MST1L-201ENST00000442552 2185 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms