Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFC4P35249 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
RFC4P35249 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RFC4P35249 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFC4P35249 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFC4P35249 FAM90A7P-201ENST00000382628 1395 ntBASIC18.99■□□□□ 0.63
RFC4P35249 FAM90A23P-201ENST00000400136 1395 ntBASIC18.99■□□□□ 0.63
RFC4P35249 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC18.99■□□□□ 0.63
RFC4P35249 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RFC4P35249 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFC4P35249 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFC4P35249 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RFC4P35249 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFC4P35249 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC18.99■□□□□ 0.63
RFC4P35249 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC18.99■□□□□ 0.63
RFC4P35249 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RFC4P35249 PFN2-206ENST00000461930 606 ntTSL 4 BASIC18.99■□□□□ 0.63
RFC4P35249 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC18.99■□□□□ 0.63
RFC4P35249 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC18.99■□□□□ 0.63
RFC4P35249 SCARNA21-201ENST00000517026 139 ntBASIC18.99■□□□□ 0.63
RFC4P35249 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC18.99■□□□□ 0.63
RFC4P35249 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC18.99■□□□□ 0.63
RFC4P35249 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC18.99■□□□□ 0.63
RFC4P35249 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RFC4P35249 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RFC4P35249 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFC4P35249 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFC4P35249 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC18.99■□□□□ 0.63
RFC4P35249 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.99■□□□□ 0.63
RFC4P35249 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFC4P35249 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
RFC4P35249 AL137783.1-201ENST00000623494 1896 ntBASIC18.99■□□□□ 0.63
RFC4P35249 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFC4P35249 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFC4P35249 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFC4P35249 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.98■□□□□ 0.63
RFC4P35249 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFC4P35249 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFC4P35249 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
RFC4P35249 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFC4P35249 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFC4P35249 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC18.98■□□□□ 0.63
RFC4P35249 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.98■□□□□ 0.63
RFC4P35249 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFC4P35249 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFC4P35249 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
RFC4P35249 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC18.98■□□□□ 0.63
RFC4P35249 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFC4P35249 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC18.98■□□□□ 0.63
RFC4P35249 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC18.98■□□□□ 0.63
RFC4P35249 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RFC4P35249 AC008825.2-201ENST00000603374 718 ntBASIC18.98■□□□□ 0.63
RFC4P35249 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
RFC4P35249 AP001065.2-201ENST00000617205 644 ntBASIC18.98■□□□□ 0.63
RFC4P35249 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFC4P35249 AC007718.1-201ENST00000621078 280 ntBASIC18.98■□□□□ 0.63
RFC4P35249 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RFC4P35249 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFC4P35249 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.98■□□□□ 0.63
RFC4P35249 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFC4P35249 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFC4P35249 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.98■□□□□ 0.63
RFC4P35249 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFC4P35249 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFC4P35249 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFC4P35249 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFC4P35249 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFC4P35249 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RFC4P35249 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
RFC4P35249 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFC4P35249 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.97■□□□□ 0.63
RFC4P35249 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFC4P35249 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RFC4P35249 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFC4P35249 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFC4P35249 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFC4P35249 PCDHA14-201ENST00000506751 2298 ntBASIC18.97■□□□□ 0.63
RFC4P35249 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFC4P35249 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC18.97■□□□□ 0.63
RFC4P35249 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RFC4P35249 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC18.97■□□□□ 0.63
RFC4P35249 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC18.97■□□□□ 0.63
RFC4P35249 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RFC4P35249 CCNC-217ENST00000523985 958 ntTSL 2 BASIC18.97■□□□□ 0.63
RFC4P35249 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC18.97■□□□□ 0.63
RFC4P35249 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC18.97■□□□□ 0.63
RFC4P35249 AC009884.2-201ENST00000603110 324 ntBASIC18.97■□□□□ 0.63
RFC4P35249 WT1-AS_6.1-201ENST00000614919 121 ntBASIC18.97■□□□□ 0.63
RFC4P35249 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.97■□□□□ 0.63
RFC4P35249 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFC4P35249 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RFC4P35249 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFC4P35249 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.97■□□□□ 0.63
RFC4P35249 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.97■□□□□ 0.63
RFC4P35249 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFC4P35249 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFC4P35249 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFC4P35249 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18.96■□□□□ 0.63
RFC4P35249 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFC4P35249 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms