Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.65□□□□□ -0.22
HOXC12P31275 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.65□□□□□ -0.22
HOXC12P31275 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.65□□□□□ -0.22
HOXC12P31275 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.65□□□□□ -0.22
HOXC12P31275 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.65□□□□□ -0.22
HOXC12P31275 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.65□□□□□ -0.22
HOXC12P31275 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.65□□□□□ -0.22
HOXC12P31275 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.65□□□□□ -0.22
HOXC12P31275 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HOXC12P31275 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.65□□□□□ -0.22
HOXC12P31275 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.65□□□□□ -0.22
HOXC12P31275 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.65□□□□□ -0.22
HOXC12P31275 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.65□□□□□ -0.22
HOXC12P31275 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC13.65□□□□□ -0.22
HOXC12P31275 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.65□□□□□ -0.22
HOXC12P31275 AC020907.1-201ENST00000616460 1350 ntBASIC13.65□□□□□ -0.22
HOXC12P31275 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.65□□□□□ -0.22
HOXC12P31275 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HOXC12P31275 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
HOXC12P31275 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HOXC12P31275 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.65□□□□□ -0.22
HOXC12P31275 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HOXC12P31275 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
HOXC12P31275 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HOXC12P31275 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HOXC12P31275 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HOXC12P31275 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HOXC12P31275 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HOXC12P31275 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.64□□□□□ -0.23
HOXC12P31275 AC127383.1-201ENST00000444697 1800 ntBASIC13.64□□□□□ -0.23
HOXC12P31275 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.64□□□□□ -0.23
HOXC12P31275 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HOXC12P31275 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HOXC12P31275 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
HOXC12P31275 CICP13-201ENST00000422015 2789 ntBASIC13.64□□□□□ -0.23
HOXC12P31275 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
HOXC12P31275 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
HOXC12P31275 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HOXC12P31275 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.64□□□□□ -0.23
HOXC12P31275 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
HOXC12P31275 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
HOXC12P31275 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HOXC12P31275 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.64□□□□□ -0.23
HOXC12P31275 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
HOXC12P31275 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HOXC12P31275 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HOXC12P31275 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.64□□□□□ -0.23
HOXC12P31275 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
HOXC12P31275 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HOXC12P31275 AC004945.1-201ENST00000416738 983 ntBASIC13.64□□□□□ -0.23
HOXC12P31275 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
HOXC12P31275 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
HOXC12P31275 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HOXC12P31275 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.64□□□□□ -0.23
HOXC12P31275 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.64□□□□□ -0.23
HOXC12P31275 AC010319.3-201ENST00000597028 470 ntBASIC13.64□□□□□ -0.23
HOXC12P31275 AC000095.1-201ENST00000603208 874 ntBASIC13.64□□□□□ -0.23
HOXC12P31275 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.64□□□□□ -0.23
HOXC12P31275 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.64□□□□□ -0.23
HOXC12P31275 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.64□□□□□ -0.23
HOXC12P31275 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.64□□□□□ -0.23
HOXC12P31275 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.64□□□□□ -0.23
HOXC12P31275 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
HOXC12P31275 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HOXC12P31275 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
HOXC12P31275 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
HOXC12P31275 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HOXC12P31275 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HOXC12P31275 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.64□□□□□ -0.23
HOXC12P31275 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.64□□□□□ -0.23
HOXC12P31275 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HOXC12P31275 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HOXC12P31275 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.64□□□□□ -0.23
HOXC12P31275 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
HOXC12P31275 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
HOXC12P31275 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HOXC12P31275 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.64□□□□□ -0.23
HOXC12P31275 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HOXC12P31275 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
HOXC12P31275 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
HOXC12P31275 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.64□□□□□ -0.23
HOXC12P31275 TUBB1P2-201ENST00000422712 1306 ntBASIC13.64□□□□□ -0.23
HOXC12P31275 TUBB1P1-201ENST00000503144 1300 ntBASIC13.64□□□□□ -0.23
HOXC12P31275 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HOXC12P31275 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
HOXC12P31275 AC092127.1-201ENST00000567093 3455 ntBASIC13.63□□□□□ -0.23
HOXC12P31275 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HOXC12P31275 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HOXC12P31275 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
HOXC12P31275 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HOXC12P31275 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HOXC12P31275 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HOXC12P31275 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HOXC12P31275 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HOXC12P31275 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HOXC12P31275 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HOXC12P31275 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HOXC12P31275 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
HOXC12P31275 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HOXC12P31275 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms