Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TM4SF1P30408 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.65■□□□□ 0.58
TM4SF1P30408 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TM4SF1P30408 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TM4SF1P30408 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TM4SF1P30408 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TM4SF1P30408 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TM4SF1P30408 SOD2-202ENST00000367054 815 ntTSL 2 BASIC18.65■□□□□ 0.58
TM4SF1P30408 NCR3-202ENST00000376071 541 ntTSL 5 BASIC18.65■□□□□ 0.58
TM4SF1P30408 AL592076.1-201ENST00000424448 303 ntBASIC18.65■□□□□ 0.58
TM4SF1P30408 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC18.65■□□□□ 0.58
TM4SF1P30408 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TM4SF1P30408 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC18.65■□□□□ 0.58
TM4SF1P30408 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC18.65■□□□□ 0.58
TM4SF1P30408 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC18.65■□□□□ 0.58
TM4SF1P30408 TPM1-223ENST00000560445 485 ntTSL 3 BASIC18.65■□□□□ 0.58
TM4SF1P30408 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC18.65■□□□□ 0.58
TM4SF1P30408 SIGLEC18P-201ENST00000602271 909 ntBASIC18.65■□□□□ 0.58
TM4SF1P30408 LINC01783-202ENST00000614408 828 ntBASIC18.65■□□□□ 0.58
TM4SF1P30408 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC18.65■□□□□ 0.58
TM4SF1P30408 BX284668.2-205ENST00000619677 828 ntBASIC18.65■□□□□ 0.58
TM4SF1P30408 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC18.65■□□□□ 0.58
TM4SF1P30408 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TM4SF1P30408 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TM4SF1P30408 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TM4SF1P30408 AC025271.4-201ENST00000621477 1726 ntBASIC18.65■□□□□ 0.58
TM4SF1P30408 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.65■□□□□ 0.58
TM4SF1P30408 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TM4SF1P30408 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
TM4SF1P30408 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TM4SF1P30408 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.65■□□□□ 0.58
TM4SF1P30408 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC18.65■□□□□ 0.58
TM4SF1P30408 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TM4SF1P30408 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TM4SF1P30408 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.65■□□□□ 0.58
TM4SF1P30408 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.64■□□□□ 0.58
TM4SF1P30408 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
TM4SF1P30408 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TM4SF1P30408 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TM4SF1P30408 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.64■□□□□ 0.57
TM4SF1P30408 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TM4SF1P30408 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TM4SF1P30408 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TM4SF1P30408 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TM4SF1P30408 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TM4SF1P30408 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TM4SF1P30408 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TM4SF1P30408 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TM4SF1P30408 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TM4SF1P30408 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC18.64■□□□□ 0.57
TM4SF1P30408 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC18.64■□□□□ 0.57
TM4SF1P30408 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC18.64■□□□□ 0.57
TM4SF1P30408 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC18.64■□□□□ 0.57
TM4SF1P30408 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC18.64■□□□□ 0.57
TM4SF1P30408 PIN4P1-201ENST00000451079 396 ntBASIC18.64■□□□□ 0.57
TM4SF1P30408 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC18.64■□□□□ 0.57
TM4SF1P30408 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC18.64■□□□□ 0.57
TM4SF1P30408 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC18.64■□□□□ 0.57
TM4SF1P30408 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TM4SF1P30408 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TM4SF1P30408 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TM4SF1P30408 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TM4SF1P30408 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC18.64■□□□□ 0.57
TM4SF1P30408 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.64■□□□□ 0.57
TM4SF1P30408 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TM4SF1P30408 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TM4SF1P30408 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TM4SF1P30408 AC012508.2-201ENST00000567613 1472 ntBASIC18.64■□□□□ 0.57
TM4SF1P30408 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.64■□□□□ 0.57
TM4SF1P30408 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TM4SF1P30408 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TM4SF1P30408 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TM4SF1P30408 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TM4SF1P30408 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF1P30408 LINC01165-201ENST00000445190 1623 ntBASIC18.63■□□□□ 0.57
TM4SF1P30408 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF1P30408 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF1P30408 AC015909.3-201ENST00000572855 1794 ntBASIC18.63■□□□□ 0.57
TM4SF1P30408 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF1P30408 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF1P30408 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TM4SF1P30408 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF1P30408 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF1P30408 MIR557-201ENST00000385239 98 ntBASIC18.63■□□□□ 0.57
TM4SF1P30408 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TM4SF1P30408 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC18.63■□□□□ 0.57
TM4SF1P30408 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC18.63■□□□□ 0.57
TM4SF1P30408 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC18.63■□□□□ 0.57
TM4SF1P30408 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TM4SF1P30408 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF1P30408 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC18.63■□□□□ 0.57
TM4SF1P30408 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF1P30408 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TM4SF1P30408 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC18.63■□□□□ 0.57
TM4SF1P30408 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.63■□□□□ 0.57
TM4SF1P30408 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TM4SF1P30408 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF1P30408 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF1P30408 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF1P30408 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms