Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTPN6P29350 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.56□□□□□ -0.08
PTPN6P29350 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PTPN6P29350 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PTPN6P29350 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.56□□□□□ -0.08
PTPN6P29350 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN6P29350 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN6P29350 GRK6P1-201ENST00000400595 1711 ntBASIC14.55□□□□□ -0.08
PTPN6P29350 AC139749.1-202ENST00000617529 3139 ntBASIC14.55□□□□□ -0.08
PTPN6P29350 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN6P29350 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.55□□□□□ -0.08
PTPN6P29350 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN6P29350 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.55□□□□□ -0.08
PTPN6P29350 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN6P29350 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN6P29350 AC018442.1-201ENST00000421439 2061 ntBASIC14.55□□□□□ -0.08
PTPN6P29350 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN6P29350 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN6P29350 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN6P29350 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN6P29350 AC236430.1-201ENST00000402231 743 ntBASIC14.55□□□□□ -0.08
PTPN6P29350 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.55□□□□□ -0.08
PTPN6P29350 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.55□□□□□ -0.08
PTPN6P29350 AC002472.2-201ENST00000442739 958 ntBASIC14.55□□□□□ -0.08
PTPN6P29350 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PTPN6P29350 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.55□□□□□ -0.08
PTPN6P29350 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.55□□□□□ -0.08
PTPN6P29350 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.55□□□□□ -0.08
PTPN6P29350 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.55□□□□□ -0.08
PTPN6P29350 RN7SL204P-201ENST00000582831 262 ntBASIC14.55□□□□□ -0.08
PTPN6P29350 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PTPN6P29350 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.55□□□□□ -0.08
PTPN6P29350 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.55□□□□□ -0.08
PTPN6P29350 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
PTPN6P29350 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN6P29350 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PTPN6P29350 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN6P29350 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.55□□□□□ -0.08
PTPN6P29350 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN6P29350 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN6P29350 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN6P29350 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.55□□□□□ -0.08
PTPN6P29350 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN6P29350 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PTPN6P29350 AL121723.1-201ENST00000445194 1519 ntBASIC14.55□□□□□ -0.08
PTPN6P29350 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.55□□□□□ -0.08
PTPN6P29350 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.55□□□□□ -0.08
PTPN6P29350 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN6P29350 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PTPN6P29350 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN6P29350 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN6P29350 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN6P29350 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN6P29350 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN6P29350 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.55□□□□□ -0.08
PTPN6P29350 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.55□□□□□ -0.08
PTPN6P29350 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
PTPN6P29350 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN6P29350 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN6P29350 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN6P29350 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN6P29350 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN6P29350 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
PTPN6P29350 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.54□□□□□ -0.08
PTPN6P29350 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.54□□□□□ -0.08
PTPN6P29350 AC097359.2-201ENST00000604992 2389 ntBASIC14.54□□□□□ -0.08
PTPN6P29350 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN6P29350 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN6P29350 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN6P29350 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN6P29350 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN6P29350 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN6P29350 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN6P29350 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN6P29350 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.54□□□□□ -0.08
PTPN6P29350 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.54□□□□□ -0.08
PTPN6P29350 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN6P29350 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN6P29350 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN6P29350 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.54□□□□□ -0.08
PTPN6P29350 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.54□□□□□ -0.08
PTPN6P29350 AC044860.1-202ENST00000559481 777 ntBASIC14.54□□□□□ -0.08
PTPN6P29350 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
PTPN6P29350 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.54□□□□□ -0.08
PTPN6P29350 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.54□□□□□ -0.08
PTPN6P29350 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN6P29350 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN6P29350 BTBD7P1-201ENST00000447253 1453 ntBASIC14.54□□□□□ -0.08
PTPN6P29350 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN6P29350 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PTPN6P29350 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN6P29350 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN6P29350 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN6P29350 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN6P29350 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN6P29350 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN6P29350 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.54□□□□□ -0.08
PTPN6P29350 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
PTPN6P29350 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN6P29350 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms